RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 CCND2P30279 289 aa17.99■□□□□ 0.47
C9orf78-201ENST00000372447 AFMP43652 599 aa17.99■□□□□ 0.47
C9orf78-201ENST00000372447 CACNB2Q08289 660 aaPredicted RBP17.99■□□□□ 0.47
C9orf78-201ENST00000372447 E2F4Q16254 413 aa17.99■□□□□ 0.47
C9orf78-201ENST00000372447 CCDC144BQ3MJ40 725 aa17.99■□□□□ 0.47
C9orf78-201ENST00000372447 DTHD1Q6ZMT9 781 aa17.99■□□□□ 0.47
C9orf78-201ENST00000372447 HSD3B7Q9H2F3 369 aa17.99■□□□□ 0.47
C9orf78-201ENST00000372447 ABHD16BQ9H3Z7 469 aa17.99■□□□□ 0.47
C9orf78-201ENST00000372447 EIF3JO75822 258 aaKnown RBP17.98■□□□□ 0.47
C9orf78-201ENST00000372447 INHAP05111 366 aa17.98■□□□□ 0.47
C9orf78-201ENST00000372447 ACVR2BQ13705 512 aa17.98■□□□□ 0.47
C9orf78-201ENST00000372447 NOLC1Q14978 699 aaKnown RBP eCLIP17.98■□□□□ 0.47
C9orf78-201ENST00000372447 SLC9C1Q4G0N8 1177 aa17.98■□□□□ 0.47
C9orf78-201ENST00000372447 FBXO16Q8IX29 292 aaPredicted RBP17.98■□□□□ 0.47
C9orf78-201ENST00000372447 KIAA1524Q8TCG1 905 aa17.98■□□□□ 0.47
C9orf78-201ENST00000372447 TMEM60Q9H2L4 133 aa17.98■□□□□ 0.47
C9orf78-201ENST00000372447 PYCARDQ9ULZ3 195 aa17.98■□□□□ 0.47
C9orf78-201ENST00000372447 MCM3APO60318 1980 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 CYP3A4P08684 503 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 ZNF865P0CJ78 1059 aaPredicted RBP17.97■□□□□ 0.47
C9orf78-201ENST00000372447 PRKAR2AP13861 404 aaKnown RBP17.97■□□□□ 0.47
C9orf78-201ENST00000372447 TXLNAP40222 546 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 PRPHP41219 470 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 MAP3K21Q5TCX8 1036 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 XRRA1Q6P2D8 792 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 TRPV1Q8NER1 839 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 CYP2W1Q8TAV3 490 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 XPO4Q9C0E2 1151 aaKnown RBP17.97■□□□□ 0.47
C9orf78-201ENST00000372447 MCOLN1Q9GZU1 580 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 PDGFCQ9NRA1 345 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 IFNKQ9P0W0 207 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 BRCA2P51587 3418 aa17.97■□□□□ 0.47
C9orf78-201ENST00000372447 CYBAP13498 195 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 ITGB5P18084 799 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 USP11P51784 963 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 DPYDQ12882 1025 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 TAPT1Q6NXT6 567 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 NEK8Q86SG6 692 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 VTA1Q9NP79 307 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 SPTLC3Q9NUV7 552 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 FAM86B1E9PN63 330 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 CCNT1O60563 726 aaKnown RBP17.96■□□□□ 0.47
C9orf78-201ENST00000372447 FAM86B2P0C5J1 330 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 FANCCQ00597 558 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 LETM2Q2VYF4 491 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 PDXDC2PQ6P474 469 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 SEPT14Q6ZU15 432 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 INPP4AQ96PE3 977 aaPredicted RBP17.96■□□□□ 0.47
C9orf78-201ENST00000372447 GSDMAQ96QA5 445 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 ZHX1Q9UKY1 873 aaPredicted RBP17.96■□□□□ 0.47
C9orf78-201ENST00000372447 UBIAD1Q9Y5Z9 338 aa17.96■□□□□ 0.47
C9orf78-201ENST00000372447 STAM2O75886 525 aa17.95■□□□□ 0.46
C9orf78-201ENST00000372447 ATP1A3P13637 1013 aa17.95■□□□□ 0.46
C9orf78-201ENST00000372447 LRMPQ12912 555 aa17.95■□□□□ 0.46
C9orf78-201ENST00000372447 ORC2Q13416 577 aaPredicted RBP17.95■□□□□ 0.46
C9orf78-201ENST00000372447 CT47A1Q5JQC4 288 aaPredicted RBP17.95■□□□□ 0.46
C9orf78-201ENST00000372447 C17orf53Q8N3J3 647 aaPredicted RBP17.95■□□□□ 0.46
C9orf78-201ENST00000372447 CACTINQ8WUQ7 758 aaKnown RBP17.95■□□□□ 0.46
C9orf78-201ENST00000372447 WDR11Q9BZH6 1224 aa17.95■□□□□ 0.46
C9orf78-201ENST00000372447 NEMFO60524 1076 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 CASP1P29466 404 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 CCND3P30281 292 aaPredicted RBP17.94■□□□□ 0.46
C9orf78-201ENST00000372447 CIITAP33076 1130 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 ZNF76P36508 570 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 CEP55Q53EZ4 464 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 COL13A1Q5TAT6 717 aaPredicted RBP17.94■□□□□ 0.46
C9orf78-201ENST00000372447 FILIP1Q7Z7B0 1213 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 LRRC8AQ8IWT6 810 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 ENOX1Q8TC92 643 aaKnown RBP17.94■□□□□ 0.46
C9orf78-201ENST00000372447 MXRA8Q9BRK3 442 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 FANCLQ9NW38 375 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 IMPACTQ9P2X3 320 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 MYH7BA7E2Y1 1941 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 MEIS1O00470 390 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 TDP2O95551 362 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 OR52Z1P0C646 297 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 ERCC5P28715 1186 aaPredicted RBP17.94■□□□□ 0.46
C9orf78-201ENST00000372447 CDC25AP30304 524 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 ADCYAP1R1P41586 468 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 TMEM63BQ5T3F8 832 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 NAP1L5Q96NT1 182 aaPredicted RBP17.94■□□□□ 0.46
C9orf78-201ENST00000372447 JADE2Q9NQC1 790 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 DISC1Q9NRI5 854 aa17.94■□□□□ 0.46
C9orf78-201ENST00000372447 LRRC37A2A6NM11 1700 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 IGLV3-22A0A075B6J6 115 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.93■□□□□ 0.46
C9orf78-201ENST00000372447 RBM47A0AV96 593 aaKnown RBP17.93■□□□□ 0.46
C9orf78-201ENST00000372447 CBFA2T2O43439 604 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 GTPBP6O43824 516 aaPredicted RBP17.93■□□□□ 0.46
C9orf78-201ENST00000372447 MYCP01106 439 aaPredicted RBP17.93■□□□□ 0.46
C9orf78-201ENST00000372447 CNGA1P29973 690 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 STAT6P42226 847 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 GSDMDP57764 484 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 SEMA3FQ13275 785 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 KARSQ15046 597 aaKnown RBP17.93■□□□□ 0.46
C9orf78-201ENST00000372447 MTFR1Q15390 333 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 GNPTABQ3T906 1256 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 ARMC5Q96C12 935 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 ZNF333Q96JL9 665 aa17.93■□□□□ 0.46
C9orf78-201ENST00000372447 AK8Q96MA6 479 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms