RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CTNNA1P35221 906 aaKnown RBP5.96□□□□□ -1.46
ATG4A-204ENST00000372246 SCTRP47872 440 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 KCNMA1Q12791 1236 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 NEDD9Q14511 834 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 PPP1R7Q15435 360 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 PREPLQ4J6C6 727 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-204ENST00000372246 ANKRD20A8PQ5CZ79 823 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 HGSNATQ68CP4 663 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 CCDC70Q6NSX1 233 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 DTHD1Q6ZMT9 781 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 B4GALNT4Q76KP1 1039 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 USP17L1Q7RTZ2 530 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 FAM133AQ8N9E0 248 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 GIMAP8Q8ND71 665 aaPredicted RBP5.96□□□□□ -1.46
ATG4A-204ENST00000372246 ESR2Q92731 530 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 SLC4A9Q96Q91 983 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 ZCWPW1Q9H0M4 648 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 NDST4Q9H3R1 872 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 CNNM2Q9H8M5 875 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 ARHGEF10LQ9HCE6 1279 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 GDF3Q9NR23 364 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 AGAP1Q9UPQ3 857 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 SIK3Q9Y2K2 1263 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 WDR17Q8IZU2 1322 aa5.96□□□□□ -1.46
ATG4A-204ENST00000372246 A0A1W2PQC6 194 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 GMNCA6NCL1 334 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 TMCO5BA8MYB1 307 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 CCNT1O60563 726 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 USO1O60763 962 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 TUBBP07437 444 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 USP17L8P0C7I0 530 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 EPB41P11171 864 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 XBP1P17861 261 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 TXKP42681 527 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 SMTNP53814 917 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 KCNQ4P56696 695 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 KCNJ2P63252 427 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 KCNC4Q03721 635 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 RNASELQ05823 741 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 LRRC14Q15048 493 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 PUM3Q15397 648 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 SNCBQ16143 134 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 KIAA0753Q2KHM9 967 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 ARMC3Q5W041 872 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 EMBQ6PCB8 327 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 GJB7Q6PEY0 223 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 CACNA2D4Q7Z3S7 1137 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 TEX11Q8IYF3 940 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 MGARPQ8TDB4 240 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 BAP1Q92560 729 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 NACAP1Q9BZK3 213 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 TRIM9Q9C026 710 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 THAP9Q9H5L6 903 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 VEZTQ9HBM0 779 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 PANK4Q9NVE7 773 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 PLAGL2Q9UPG8 496 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 RTCBQ9Y3I0 505 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 MAP3K15Q6ZN16 1313 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 COL4A1P02462 1669 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 MAGEB6P1A0A0J9YX57 407 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 GRID2IPA4D2P6 1211 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 MYMKA6NI61 221 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 H0YGN5 161 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 TTI1O43156 1089 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 CYTH3O43739 400 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 CAND2O75155 1236 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 RHOBTB3O94955 611 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 SLC10A3P09131 477 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 FGFR2P21802 821 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 EEF1GP26641 437 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 CDR1P51861 262 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 INHBEP58166 350 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 IFI35P80217 286 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 RAPGEF1Q13905 1077 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 CDC37Q16543 378 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 ALS2CLQ60I27 953 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 KIF6Q6ZMV9 814 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 CABP7Q86V35 215 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 IFT20Q8IY31 132 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 BLIDQ8IZY5 108 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 SLC17A8Q8NDX2 589 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 ZCRB1Q8TBF4 217 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 NSMCE1Q8WV22 266 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 CAVIN3Q969G5 261 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 HVCN1Q96D96 273 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 SELENOSQ9BQE4 189 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 MMTAG2Q9BU76 263 aaKnown RBP5.95□□□□□ -1.46
ATG4A-204ENST00000372246 NUP58Q9BVL2 599 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 KIF9Q9HAQ2 790 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 TMBIM4Q9HC24 238 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.95□□□□□ -1.466e-6■■■■■ 48.1
ATG4A-204ENST00000372246 TFCP2L1Q9NZI6 479 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 SLC12A6Q9UHW9 1150 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 PCDHA6Q9UN73 950 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 ATP8A1Q9Y2Q0 1164 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 PCDHA8Q9Y5H6 950 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 NFS1Q9Y697 457 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 MYH2Q9UKX2 1941 aa5.95□□□□□ -1.46
ATG4A-204ENST00000372246 NOL4O94818 638 aa5.94□□□□□ -1.46
ATG4A-204ENST00000372246 SLURP2P0DP57 97 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms