RNA–Protein interactions for RNA: ENST00000371601.4

NPDC1-202, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPDC1, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-202ENST00000371601 IL27Q8NEV9 243 aa23.3■■□□□ 1.32
NPDC1-202ENST00000371601 EDIL3O43854 480 aa23.3■■□□□ 1.32
NPDC1-202ENST00000371601 KRT2P35908 639 aa23.3■■□□□ 1.32
NPDC1-202ENST00000371601 ACTR2P61160 394 aa23.3■■□□□ 1.32
NPDC1-202ENST00000371601 PIK3AP1Q6ZUJ8 805 aa23.3■■□□□ 1.32
NPDC1-202ENST00000371601 SESTD1Q86VW0 696 aa23.3■■□□□ 1.32
NPDC1-202ENST00000371601 GTF2IRD1Q9UHL9 959 aa23.3■■□□□ 1.32
NPDC1-202ENST00000371601 ZNF200P98182 395 aaPredicted RBP23.29■■□□□ 1.32
NPDC1-202ENST00000371601 GUCY1B3Q02153 619 aa23.29■■□□□ 1.32
NPDC1-202ENST00000371601 LETM2Q2VYF4 491 aa23.29■■□□□ 1.32
NPDC1-202ENST00000371601 KRT40Q6A162 431 aa23.29■■□□□ 1.32
NPDC1-202ENST00000371601 RETREG2Q8NC44 543 aa23.29■■□□□ 1.32
NPDC1-202ENST00000371601 NOC4LQ9BVI4 516 aaKnown RBP23.29■■□□□ 1.32
NPDC1-202ENST00000371601 SMARCAD1Q9H4L7 1026 aa23.29■■□□□ 1.32
NPDC1-202ENST00000371601 AZI2Q9H6S1 392 aa23.29■■□□□ 1.32
NPDC1-202ENST00000371601 TBC1D22BQ9NU19 505 aa23.29■■□□□ 1.32
NPDC1-202ENST00000371601 TRIOBPQ9H2D6 2365 aa23.29■■□□□ 1.32
NPDC1-202ENST00000371601 CSF2RAP15509 400 aa23.28■■□□□ 1.32
NPDC1-202ENST00000371601 MARK3P27448 753 aa23.28■■□□□ 1.32
NPDC1-202ENST00000371601 HMGN5P82970 282 aaKnown RBP23.28■■□□□ 1.32
NPDC1-202ENST00000371601 NR5A1Q13285 461 aa23.28■■□□□ 1.32
NPDC1-202ENST00000371601 TDHQ8IZJ6 230 aa23.28■■□□□ 1.32
NPDC1-202ENST00000371601 RNPEPQ9H4A4 650 aa23.28■■□□□ 1.32
NPDC1-202ENST00000371601 TCEAL9Q9UHQ7 104 aa23.28■■□□□ 1.32
NPDC1-202ENST00000371601 UMODL1Q5DID0 1318 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 C17orf102A2RUQ5 167 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 DHX15O43143 795 aaKnown RBP23.27■■□□□ 1.32
NPDC1-202ENST00000371601 CD2BP2O95400 341 aaKnown RBP23.27■■□□□ 1.32
NPDC1-202ENST00000371601 TDP2O95551 362 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 SMIM10L2AP0DMW4 78 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 SMIM10L2BP0DMW5 78 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 MCM2P49736 904 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 SAFBQ15424 915 aaKnown RBP eCLIP23.27■■□□□ 1.32
NPDC1-202ENST00000371601 TMX3Q96JJ7 454 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 C8orf76Q96K31 380 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 SETD4Q9NVD3 440 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 ERAP1Q9NZ08 941 aa23.27■■□□□ 1.32
NPDC1-202ENST00000371601 BTBD18B2RXH4 712 aa23.26■■□□□ 1.31
NPDC1-202ENST00000371601 BACH1O14867 736 aa23.26■■□□□ 1.31
NPDC1-202ENST00000371601 MSH4O15457 936 aa23.26■■□□□ 1.31
NPDC1-202ENST00000371601 MMP1P03956 469 aa23.26■■□□□ 1.31
NPDC1-202ENST00000371601 BFSP2Q13515 415 aa23.26■■□□□ 1.31
NPDC1-202ENST00000371601 ATP6V0A1Q93050 837 aa23.26■■□□□ 1.31
NPDC1-202ENST00000371601 SAMM50Q9Y512 469 aa23.26■■□□□ 1.31
NPDC1-202ENST00000371601 CYP3A7-CYP3A51PA0A087WV96 503 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 A0A1W2PPC1 479 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 GNAT1P11488 350 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 CYP3A7P24462 503 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 STAT5BP51692 787 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 EPHB4P54760 987 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 PPIGQ13427 754 aaKnown RBP eCLIP23.25■■□□□ 1.315e-7■■■■□ 23.6
NPDC1-202ENST00000371601 SHHQ15465 462 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 NEK8Q86SG6 692 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 DIS3L2Q8IYB7 885 aaKnown RBP23.25■■□□□ 1.31
NPDC1-202ENST00000371601 GJA10Q969M2 543 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 LENG9Q96B70 501 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 SCLYQ96I15 445 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 DDX25Q9UHL0 483 aaKnown RBP23.25■■□□□ 1.31
NPDC1-202ENST00000371601 SCN10AQ9Y5Y9 1956 aa23.25■■□□□ 1.31
NPDC1-202ENST00000371601 MARCH6O60337 910 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 CCNT1O60563 726 aaKnown RBP23.24■■□□□ 1.31
NPDC1-202ENST00000371601 CCNE2O96020 404 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 ACRP10323 421 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 HIC1Q14526 733 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 Q4G0T1 1027 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 EARS2Q5JPH6 523 aaKnown RBP23.24■■□□□ 1.31
NPDC1-202ENST00000371601 MIS18BP1Q6P0N0 1132 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 LAMA3Q16787 3333 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 GAS7O60861 476 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 ATG7O95352 703 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 C9orf50Q5SZB4 431 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 SWSAP1Q6NVH7 229 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 ABHD15Q6UXT9 468 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 CCDC155Q8N6L0 562 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 PCYT2Q99447 389 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 WNT8AQ9H1J5 351 aa23.24■■□□□ 1.31
NPDC1-202ENST00000371601 TREHO43280 583 aa23.23■■□□□ 1.31
NPDC1-202ENST00000371601 LGR5O75473 907 aa23.23■■□□□ 1.31
NPDC1-202ENST00000371601 PTK7Q13308 1070 aa23.23■■□□□ 1.31
NPDC1-202ENST00000371601 LRCH2Q5VUJ6 765 aa23.23■■□□□ 1.31
NPDC1-202ENST00000371601 RPUSD2Q8IZ73 545 aaKnown RBP23.23■■□□□ 1.31
NPDC1-202ENST00000371601 CTAGE1Q96RT6 745 aa23.23■■□□□ 1.31
NPDC1-202ENST00000371601 TRPC6Q9Y210 931 aa23.23■■□□□ 1.31
NPDC1-202ENST00000371601 FAM205CA6NFA0 338 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 IGBP1P78318 339 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 KRT76Q01546 638 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 PPFIA1Q13136 1202 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 GNL2Q13823 731 aaKnown RBP23.22■■□□□ 1.31
NPDC1-202ENST00000371601 FAM160B1Q5W0V3 765 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 ZNF746Q6NUN9 644 aaPredicted RBP23.22■■□□□ 1.31
NPDC1-202ENST00000371601 PDXDC2PQ6P474 469 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 MOXD1Q6UVY6 613 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 PLPPR4Q7Z2D5 763 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 TRMT1LQ7Z2T5 733 aaKnown RBP23.22■■□□□ 1.31
NPDC1-202ENST00000371601 DEFB128Q7Z7B8 93 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 CAGE1Q8TC20 777 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 TNPO1Q92973 898 aaKnown RBP23.22■■□□□ 1.31
NPDC1-202ENST00000371601 RIT2Q99578 217 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 TEKT3Q9BXF9 490 aa23.22■■□□□ 1.31
NPDC1-202ENST00000371601 ZNF302Q9NR11 478 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms