RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 IFIH1Q9BYX4 1025 aaKnown RBP17.4■□□□□ 0.38
RPF1-202ENST00000370656 CNNM2Q9H8M5 875 aa17.4■□□□□ 0.38
RPF1-202ENST00000370656 MYO7AQ13402 2215 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 GCOM1H8Y6P7 765 aaPredicted RBP17.39■□□□□ 0.37
RPF1-202ENST00000370656 OPLAHO14841 1288 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 TREHO43280 583 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 LGALS2P05162 132 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 POLR2MP0CAP2 368 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 HOXA13P31271 388 aaPredicted RBP17.39■□□□□ 0.37
RPF1-202ENST00000370656 HOXC8P31273 242 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 SP2Q02086 613 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 NHLH1Q02575 133 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 PTH1RQ03431 593 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 NECTIN1Q15223 517 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 RNPEPQ9H4A4 650 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 CLDND1Q9NY35 253 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 RWDD3Q9Y3V2 267 aa17.39■□□□□ 0.37
RPF1-202ENST00000370656 POTEB3A0JP26 581 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 CTSHP09668 335 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 ZP2Q05996 745 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 NEDD9Q14511 834 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 COL19A1Q14993 1142 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 RABEP1Q15276 862 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 POTEBQ6S5H4 581 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 ADHFE1Q8IWW8 467 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 FIBCD1Q8N539 461 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 POP1Q99575 1024 aaKnown RBP17.38■□□□□ 0.37
RPF1-202ENST00000370656 LMAN2LQ9H0V9 348 aa17.38■□□□□ 0.37
RPF1-202ENST00000370656 ZNF215Q9UL58 517 aaPredicted RBP17.38■□□□□ 0.37
RPF1-202ENST00000370656 STAM2O75886 525 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 RB1P06400 928 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 CTNNB1P35222 781 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 FCHSD1Q86WN1 690 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 STAG2Q8N3U4 1231 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 IL31RAQ8NI17 732 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 MTMR8Q96EF0 704 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 C11orf84Q9BUA3 381 aaPredicted RBP17.37■□□□□ 0.37
RPF1-202ENST00000370656 DSCC1Q9BVC3 393 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 DOCK5Q9H7D0 1870 aa17.37■□□□□ 0.37
RPF1-202ENST00000370656 BAZ2BQ9UIF8 2168 aaKnown RBP17.36■□□□□ 0.37
RPF1-202ENST00000370656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.36■□□□□ 0.37
RPF1-202ENST00000370656 METTL7BQ6UX53 244 aa17.36■□□□□ 0.37
RPF1-202ENST00000370656 HOMER1Q86YM7 354 aa17.36■□□□□ 0.37
RPF1-202ENST00000370656 SNX27Q96L92 541 aa17.36■□□□□ 0.37
RPF1-202ENST00000370656 FBXL18Q96ME1 805 aa17.36■□□□□ 0.37
RPF1-202ENST00000370656 SETD4Q9NVD3 440 aa17.36■□□□□ 0.37
RPF1-202ENST00000370656 ATG2AQ2TAZ0 1938 aa17.35■□□□□ 0.37
RPF1-202ENST00000370656 C19orf67A6NJJ6 358 aa17.35■□□□□ 0.37
RPF1-202ENST00000370656 C5orf67F2Z3F1 127 aa17.35■□□□□ 0.37
RPF1-202ENST00000370656 PPP1R11O60927 126 aaPredicted RBP17.35■□□□□ 0.37
RPF1-202ENST00000370656 BECN1Q14457 450 aa17.35■□□□□ 0.37
RPF1-202ENST00000370656 RPAINQ86UA6 219 aa17.35■□□□□ 0.37
RPF1-202ENST00000370656 GPKOWQ92917 476 aaPredicted RBP eCLIP17.35■□□□□ 0.37
RPF1-202ENST00000370656 MFSD14AQ96MC6 490 aa17.35■□□□□ 0.37
RPF1-202ENST00000370656 MAD2L2Q9UI95 211 aa17.35■□□□□ 0.37
RPF1-202ENST00000370656 PALM3A6NDB9 673 aaPredicted RBP17.34■□□□□ 0.37
RPF1-202ENST00000370656 ICAM3P32942 547 aa17.34■□□□□ 0.37
RPF1-202ENST00000370656 BMPR1AP36894 532 aa17.34■□□□□ 0.37
RPF1-202ENST00000370656 ARHGAP4P98171 946 aa17.34■□□□□ 0.37
RPF1-202ENST00000370656 FAM26DQ5JW98 314 aa17.34■□□□□ 0.37
RPF1-202ENST00000370656 CYFIP1Q7L576 1253 aa17.34■□□□□ 0.37
RPF1-202ENST00000370656 ZFP91Q96JP5 570 aaPredicted RBP17.34■□□□□ 0.37
RPF1-202ENST00000370656 TM6SF1Q9BZW5 370 aa17.34■□□□□ 0.37
RPF1-202ENST00000370656 RBM8AQ9Y5S9 174 aaKnown RBP17.34■□□□□ 0.37
RPF1-202ENST00000370656 ZNF318Q5VUA4 2279 aa17.33■□□□□ 0.37
RPF1-202ENST00000370656 ADGRA3Q8IWK6 1321 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 NRCAMQ92823 1304 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 SPATA31C2B4DYI2 1134 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 FIBPO43427 364 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 IRS1P35568 1242 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 TRDNQ13061 729 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 SMAD2Q15796 467 aaKnown RBP17.33■□□□□ 0.36
RPF1-202ENST00000370656 CTC1Q2NKJ3 1217 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 RSPH3Q86UC2 560 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 PPP2R3CQ969Q6 453 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 INPP4AQ96PE3 977 aaPredicted RBP17.33■□□□□ 0.36
RPF1-202ENST00000370656 PIGSQ96S52 555 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 GPR20Q99678 358 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 SNX14Q9Y5W7 946 aa17.33■□□□□ 0.36
RPF1-202ENST00000370656 PNMA6FA0A0J9YX94 578 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 RBAK-RBAKDNI3L0D1 243 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 LTBRP36941 435 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 SEC23AQ15436 765 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 UTP14CQ5TAP6 766 aaKnown RBP17.32■□□□□ 0.36
RPF1-202ENST00000370656 TAF2Q6P1X5 1199 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 RASEFQ8IZ41 740 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 GIMAP8Q8ND71 665 aaPredicted RBP17.32■□□□□ 0.36
RPF1-202ENST00000370656 LMBR1Q8WVP7 490 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 OSBPL7Q9BZF2 842 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 RIOX1Q9H6W3 641 aa17.32■□□□□ 0.36
RPF1-202ENST00000370656 TTC3P53804 2025 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 FRMPD4Q14CM0 1322 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 ERICH2A1L162 156 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 MBTPS2O43462 519 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 ADAM17P78536 824 aa17.31■□□□□ 0.36
RPF1-202ENST00000370656 MRPS9P82933 396 aaKnown RBP17.31■□□□□ 0.36
RPF1-202ENST00000370656 HYAL1Q12794 435 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms