RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 NAPAP54920 295 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 RTN1Q16799 776 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 TSGA10IPQ3SY00 556 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 RSPH3Q86UC2 560 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 TRIM50Q86XT4 487 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 RAB11FIP4Q86YS3 637 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 MYOCDQ8IZQ8 938 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 DBF4BQ8NFT6 615 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 ADAMTS19Q8TE59 1207 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 LMBR1Q8WVP7 490 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 SEPT1Q8WYJ6 367 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 BCAS3Q9H6U6 928 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 SETD4Q9NVD3 440 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 ERAP1Q9NZ08 941 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 PCDHA6Q9UN73 950 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 PCDHA8Q9Y5H6 950 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 NCOR1O75376 2440 aa16.99■□□□□ 0.31
CTSD-202ENST00000367196 EPOPA6NHQ4 379 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 RFXAPO00287 272 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 CTSHP09668 335 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 ITGB5P18084 799 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 FGD1P98174 961 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 GRB10Q13322 594 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 UBE2SQ16763 222 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 GLG1Q92896 1179 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 SMARCAD1Q9H4L7 1026 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 JADE2Q9NQC1 790 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 UBIAD1Q9Y5Z9 338 aa16.98■□□□□ 0.31
CTSD-202ENST00000367196 CCDC196A0A1B0GTZ2 297 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 hCG_1642624A0A1W2PR95 340 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 LCHNA4D1U4 455 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 ARHGEF15O94989 841 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 ADCY7P51828 1080 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 ERVK-21P61565 698 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 PPFIA1Q13136 1202 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 WWC2Q6AWC2 1192 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 TMCO2Q7Z6W1 182 aaPredicted RBP16.97■□□□□ 0.31
CTSD-202ENST00000367196 RPAINQ86UA6 219 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 SAMD11Q96NU1 681 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 UHRF1Q96T88 793 aaPredicted RBP16.97■□□□□ 0.31
CTSD-202ENST00000367196 SDF4Q9BRK5 362 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 AZI2Q9H6S1 392 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 JPH1Q9HDC5 661 aaPredicted RBP16.97■□□□□ 0.31
CTSD-202ENST00000367196 RIC8AQ9NPQ8 531 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 TRANK1O15050 2925 aa16.97■□□□□ 0.31
CTSD-202ENST00000367196 MUC3AQ02505 3323 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 LINC01553A4QN01 128 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 GOLGA8AA7E2F4 631 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 GOLGA8BA8MQT2 603 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 ADAM17P78536 824 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 AP3B2Q13367 1082 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 TCTN1Q2MV58 587 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 FAM26DQ5JW98 314 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 FAM117BQ6P1L5 589 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 IFIH1Q9BYX4 1025 aaKnown RBP16.96■□□□□ 0.31
CTSD-202ENST00000367196 TUBE1Q9UJT0 475 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 COL4A6Q14031 1691 aa16.96■□□□□ 0.31
CTSD-202ENST00000367196 NFASCO94856 1347 aa16.96■□□□□ 0.3
CTSD-202ENST00000367196 KLF18A0A0U1RQI7 1052 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 ATP9AO75110 1047 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 HTRA4P83105 476 aaPredicted RBP16.95■□□□□ 0.3
CTSD-202ENST00000367196 EXOSC10Q01780 885 aaKnown RBP16.95■□□□□ 0.3
CTSD-202ENST00000367196 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
CTSD-202ENST00000367196 COL9A3Q14050 684 aaPredicted RBP16.95■□□□□ 0.3
CTSD-202ENST00000367196 GRIK4Q16099 956 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.95■□□□□ 0.3
CTSD-202ENST00000367196 GDPD5Q8WTR4 605 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 HLA-CQ95604 372 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 YME1L1Q96TA2 773 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 MXRA8Q9BRK3 442 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 KCNH7Q9NS40 1196 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 BARHL2Q9NY43 387 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 PKD2L1Q9P0L9 805 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 SLC9A2Q9UBY0 812 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 MTUS1Q9ULD2 1270 aa16.95■□□□□ 0.3
CTSD-202ENST00000367196 NAP1L2Q9ULW6 460 aaPredicted RBP16.95■□□□□ 0.3
CTSD-202ENST00000367196 GSTTP1A0A1W2PQM5 241 aa16.94■□□□□ 0.3
CTSD-202ENST00000367196 RRN3P2A6NIE6 340 aa16.94■□□□□ 0.3
CTSD-202ENST00000367196 LPXNO60711 386 aa16.94■□□□□ 0.3
CTSD-202ENST00000367196 MCTP2Q6DN12 878 aa16.94■□□□□ 0.3
CTSD-202ENST00000367196 FBXO22Q8NEZ5 403 aa16.94■□□□□ 0.3
CTSD-202ENST00000367196 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
CTSD-202ENST00000367196 CCDC12Q8WUD4 166 aaPredicted RBP16.94■□□□□ 0.3
CTSD-202ENST00000367196 TOP1MTQ969P6 601 aa16.94■□□□□ 0.3
CTSD-202ENST00000367196 V9GY48 417 aaPredicted RBP16.94■□□□□ 0.3
CTSD-202ENST00000367196 MBLAC1A4D2B0 266 aaPredicted RBP16.93■□□□□ 0.3
CTSD-202ENST00000367196 SMCO2A6NFE2 343 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 MARK3P27448 753 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 METAP2P50579 478 aaKnown RBP eCLIP16.93■□□□□ 0.3
CTSD-202ENST00000367196 PTPROQ16827 1216 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 CEP55Q53EZ4 464 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 RASEFQ8IZ41 740 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 ANO3Q9BYT9 981 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 SUGCTQ9HAC7 445 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 BRPF3Q9ULD4 1205 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 TRPC6Q9Y210 931 aa16.93■□□□□ 0.3
CTSD-202ENST00000367196 M0QZ92 97 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 STXBP3O00186 592 aa16.92■□□□□ 0.3
CTSD-202ENST00000367196 ZNF76P36508 570 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms