RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 DYDC2Q96IM9 177 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 BCL9O00512 1426 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 PPP6R2O75170 966 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 P4HBP07237 508 aaKnown RBP10.61□□□□□ -0.71
GABPA-201ENST00000354828 NSFP46459 744 aaKnown RBP10.61□□□□□ -0.71
GABPA-201ENST00000354828 ZNF568Q3ZCX4 644 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 BSPRYQ5W0U4 402 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 PDZD4Q76G19 769 aaPredicted RBP10.61□□□□□ -0.71
GABPA-201ENST00000354828 CYFIP1Q7L576 1253 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 OPTNQ96CV9 577 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 LY9Q9HBG7 655 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
GABPA-201ENST00000354828 A0A087WWV3 80 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 RNF8O76064 485 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 TNFAIP2Q03169 654 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 PPFIA1Q13136 1202 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 SBK1Q52WX2 424 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 ARMCX2Q7L311 632 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 OR6B3Q8NGW1 331 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 IFT81Q8WYA0 676 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 JPH1Q9HDC5 661 aaPredicted RBP10.6□□□□□ -0.71
GABPA-201ENST00000354828 PRR12Q9ULL5 1215 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 POTEMA6NI47 508 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 THAP12O43422 761 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 HSF2BPO75031 334 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 TRPA1O75762 1119 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 CD58P19256 250 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 ZNF543Q08ER8 600 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 SCARA5Q6ZMJ2 495 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 TRIML1Q8N9V2 468 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 CBX8Q9HC52 389 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 PPP2R3BQ9Y5P8 575 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 ADM5C9JUS6 153 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 XRCC6P12956 609 aaKnown RBP eCLIP10.6□□□□□ -0.71
GABPA-201ENST00000354828 UAP1Q16222 522 aaPredicted RBP10.6□□□□□ -0.71
GABPA-201ENST00000354828 CASC4Q6P4E1 433 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 C4orf50Q6ZRC1 276 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 C16orf86Q6ZW13 317 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 SIX6OS1Q8N1H7 587 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 NME8Q8N427 588 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 RNF139Q8WU17 664 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 MTA3Q9BTC8 594 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 PCDHA10Q9Y5I2 948 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 ZNF233A6NK53 670 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 CAPN15O75808 1086 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 NR3C2P08235 984 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 GCLCP48506 637 aaPredicted RBP10.6□□□□□ -0.71
GABPA-201ENST00000354828 PSMC5P62195 406 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 PPP2R3AQ06190 1150 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 CHST13Q8NET6 341 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 ODF2LQ9ULJ1 636 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 PFASO15067 1338 aa10.6□□□□□ -0.71
GABPA-201ENST00000354828 COBLO75128 1261 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 CAP2P40123 477 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 KIF11P52732 1056 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 ALCAMQ13740 583 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 PLEKHH3Q7Z736 793 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 MB21D2Q8IYB1 491 aaPredicted RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 CCDC26Q8TAB7 109 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 ZDHHC15Q96MV8 337 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 EFCC1Q9HA90 598 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 POLR3EQ9NVU0 708 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 BARHL2Q9NY43 387 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 NFIAQ12857 509 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 USP50Q70EL3 339 aaPredicted RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 TTC30AQ86WT1 665 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 TMTC1Q8IUR5 882 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 PPANQ9NQ55 473 aaKnown RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 GINM1Q9NU53 330 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 FAM184BQ9ULE4 1060 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 LDHAP00338 332 aaKnown RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 INPP5BP32019 993 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 PTF1AQ7RTS3 328 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 IQCDQ96DY2 449 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 ZNF512BQ96KM6 892 aaPredicted RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 HEXIM2Q96MH2 286 aaKnown RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 PXDNQ92626 1479 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 DISP2A7MBM2 1401 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 PHLPP2Q6ZVD8 1323 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 SMIM23A6NLE4 172 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 IRX5P78411 483 aaPredicted RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 CEP55Q53EZ4 464 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 PEX26Q7Z412 305 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 SCN4BQ8IWT1 228 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 GPR161Q8N6U8 529 aaKnown RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 GANCQ8TET4 914 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 SECISBP2LQ93073 1101 aaKnown RBP10.59□□□□□ -0.71
GABPA-201ENST00000354828 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
GABPA-201ENST00000354828 SH3BP5O60239 455 aa10.58□□□□□ -0.72
GABPA-201ENST00000354828 ARL6IP4Q66PJ3 421 aaKnown RBP10.58□□□□□ -0.72
GABPA-201ENST00000354828 TXNRD3Q86VQ6 643 aa10.58□□□□□ -0.72
GABPA-201ENST00000354828 SYCE1Q8N0S2 351 aa10.58□□□□□ -0.72
GABPA-201ENST00000354828 NEK9Q8TD19 979 aa10.58□□□□□ -0.72
GABPA-201ENST00000354828 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
GABPA-201ENST00000354828 RAB20Q9NX57 234 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms