RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 RALGAPA2Q2PPJ7 1873 aa16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 hCG_1642624A0A1W2PR95 340 aa16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 ATP9AO75110 1047 aa16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 HTRA4P83105 476 aaPredicted RBP16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 MYOCDQ8IZQ8 938 aa16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 GIMAP8Q8ND71 665 aaPredicted RBP16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 LMBR1Q8WVP7 490 aa16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 SEPT8Q92599 483 aa16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 INSL6Q9Y581 213 aa16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 SLC12A7Q9Y666 1083 aa16.62■□□□□ 0.25
PRPF40A-201ENST00000354363 KCNA2P16389 499 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 ITGB5P18084 799 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 ARHGAP4P98171 946 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 UBE2SQ16763 222 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 TMTC3Q6ZXV5 915 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 CCDC82Q8N4S0 544 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 FANCBQ8NB91 859 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 HLA-CQ95604 372 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 ANO2Q9NQ90 1003 aa16.61■□□□□ 0.25
PRPF40A-201ENST00000354363 TCF7P36402 384 aaPredicted RBP16.6■□□□□ 0.25
PRPF40A-201ENST00000354363 FAM26DQ5JW98 314 aa16.6■□□□□ 0.25
PRPF40A-201ENST00000354363 SGMS1Q86VZ5 419 aa16.6■□□□□ 0.25
PRPF40A-201ENST00000354363 SP7Q8TDD2 431 aaPredicted RBP16.6■□□□□ 0.25
PRPF40A-201ENST00000354363 CDHR1Q96JP9 859 aa16.6■□□□□ 0.25
PRPF40A-201ENST00000354363 UBIAD1Q9Y5Z9 338 aa16.6■□□□□ 0.25
PRPF40A-201ENST00000354363 ATG2AQ2TAZ0 1938 aa16.6■□□□□ 0.25
PRPF40A-201ENST00000354363 NRCAMQ92823 1304 aa16.6■□□□□ 0.25
PRPF40A-201ENST00000354363 GSTTP1A0A1W2PQM5 241 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 MICU3Q86XE3 530 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 C17orf80Q9BSJ5 609 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 PCDHA6Q9UN73 950 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 PCDHA8Q9Y5H6 950 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 MYO7AQ13402 2215 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 TTC3P53804 2025 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 SPDYE3A6NKU9 549 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 HEATR3Q7Z4Q2 680 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 FBXO22Q8NEZ5 403 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 SEPT1Q8WYJ6 367 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 TOP1MTQ969P6 601 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 BDP1A6H8Y1 2624 aa16.59■□□□□ 0.25
PRPF40A-201ENST00000354363 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 COL4A6Q14031 1691 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 CHRNA1P02708 482 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 MTMR1Q13613 665 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 BMP2KLQ5H9B9 411 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 RUFY4Q6ZNE9 571 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 RPAINQ86UA6 219 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 SKAP1Q86WV1 359 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 APBB2Q92870 758 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 JADE2Q9NQC1 790 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 PKD2L1Q9P0L9 805 aa16.58■□□□□ 0.24
PRPF40A-201ENST00000354363 UPP2O95045 317 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 PPFIA1Q13136 1202 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 RNF20Q5VTR2 975 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 WWC2Q6AWC2 1192 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 TAF2Q6P1X5 1199 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 SYNE3Q6ZMZ3 975 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 NEK1Q96PY6 1258 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 YME1L1Q96TA2 773 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 IFIH1Q9BYX4 1025 aaKnown RBP16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 EVPLQ92817 2033 aa16.57■□□□□ 0.24
PRPF40A-201ENST00000354363 MAFGO15525 162 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 COL9A1P20849 921 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 MARK3P27448 753 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 GRIK4Q16099 956 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 SAMD11Q96NU1 681 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 SMARCAD1Q9H4L7 1026 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 EHMT1Q9H9B1 1298 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 ERAP1Q9NZ08 941 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 MYH9P35579 1960 aaKnown RBP16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 WDR81Q562E7 1941 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 MBLAC1A4D2B0 266 aaPredicted RBP16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 MGAT3Q09327 533 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 EPC2Q52LR7 807 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 GLG1Q92896 1179 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 TCEANC2Q96MN5 208 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 PCYT2Q99447 389 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 MXRA8Q9BRK3 442 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 RBM28Q9NW13 759 aaKnown RBP16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 TUBE1Q9UJT0 475 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
PRPF40A-201ENST00000354363 GHRP10912 638 aa16.55■□□□□ 0.24
PRPF40A-201ENST00000354363 NAPAP54920 295 aa16.55■□□□□ 0.24
PRPF40A-201ENST00000354363 FUT2Q10981 343 aa16.55■□□□□ 0.24
PRPF40A-201ENST00000354363 MARCH8Q5T0T0 291 aa16.55■□□□□ 0.24
PRPF40A-201ENST00000354363 UBE2ZQ9H832 354 aaPredicted RBP16.55■□□□□ 0.24
PRPF40A-201ENST00000354363 JPH1Q9HDC5 661 aaPredicted RBP16.55■□□□□ 0.24
PRPF40A-201ENST00000354363 RIC8AQ9NPQ8 531 aa16.55■□□□□ 0.24
PRPF40A-201ENST00000354363 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.54■□□□□ 0.24
PRPF40A-201ENST00000354363 LPIN1Q14693 890 aa16.54■□□□□ 0.24
PRPF40A-201ENST00000354363 RTN1Q16799 776 aa16.54■□□□□ 0.24
PRPF40A-201ENST00000354363 ADCK5Q3MIX3 580 aa16.54■□□□□ 0.24
PRPF40A-201ENST00000354363 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
PRPF40A-201ENST00000354363 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
PRPF40A-201ENST00000354363 RSPH3Q86UC2 560 aa16.54■□□□□ 0.24
PRPF40A-201ENST00000354363 TMEM192Q8IY95 271 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms