RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 GBF1Q92538 1859 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
TPM4-202ENST00000344824 ADAMTS3O15072 1205 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 MMP1P03956 469 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 SUPT20HL2P0C7V6 817 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 CLK2P49760 499 aaKnown RBP15.66■□□□□ 0.1
TPM4-202ENST00000344824 ARHGAP4P98171 946 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 PPIGQ13427 754 aaKnown RBP eCLIP15.66■□□□□ 0.1
TPM4-202ENST00000344824 SAFBQ15424 915 aaKnown RBP eCLIP15.66■□□□□ 0.1
TPM4-202ENST00000344824 TRIM50Q86XT4 487 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 TMEM199Q8N511 208 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 BICD2Q8TD16 824 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 LRCH3Q96II8 777 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 MXRA8Q9BRK3 442 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 PHF20Q9BVI0 1012 aa15.66■□□□□ 0.1
TPM4-202ENST00000344824 NOC4LQ9BVI4 516 aaKnown RBP15.66■□□□□ 0.1
TPM4-202ENST00000344824 KIF28PB7ZC32 967 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 DDX39AO00148 427 aaKnown RBP15.65■□□□□ 0.1
TPM4-202ENST00000344824 ATP9AO75110 1047 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 F2P00734 622 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 CSF2RAP15509 400 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 SREBF1P36956 1147 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 SHHQ15465 462 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 PTGISQ16647 500 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 GDF6Q6KF10 455 aaPredicted RBP15.65■□□□□ 0.1
TPM4-202ENST00000344824 MFSD5Q6N075 450 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 DIS3L2Q8IYB7 885 aaKnown RBP15.65■□□□□ 0.1
TPM4-202ENST00000344824 GIMAP8Q8ND71 665 aaPredicted RBP15.65■□□□□ 0.1
TPM4-202ENST00000344824 CYP2W1Q8TAV3 490 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 TNPO1Q92973 898 aaKnown RBP15.65■□□□□ 0.1
TPM4-202ENST00000344824 SCLYQ96I15 445 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 RNPC3Q96LT9 517 aaKnown RBP15.65■□□□□ 0.1
TPM4-202ENST00000344824 UIMC1Q96RL1 719 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 GPR20Q99678 358 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 SENP7Q9BQF6 1050 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 JADE2Q9NQC1 790 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 SH3GLB2Q9NR46 395 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 HDAC6Q9UBN7 1215 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 TELO2Q9Y4R8 837 aa15.65■□□□□ 0.1
TPM4-202ENST00000344824 PPFIA4O75335 1185 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 ACRP10323 421 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 PDIA4P13667 645 aaKnown RBP15.64■□□□□ 0.09
TPM4-202ENST00000344824 KCNA2P16389 499 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 KRT2P35908 639 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 EPHB4P54760 987 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 PTPN11Q06124 597 aaPredicted RBP15.64■□□□□ 0.09
TPM4-202ENST00000344824 RESTQ13127 1097 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 CEP55Q53EZ4 464 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 OXER1Q8TDS5 423 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 CHAMP1Q96JM3 812 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 SDF4Q9BRK5 362 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 BRMS1Q9HCU9 246 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 KCNH7Q9NS40 1196 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 ZNF215Q9UL58 517 aaPredicted RBP15.64■□□□□ 0.09
TPM4-202ENST00000344824 TCHHQ07283 1943 aa15.64■□□□□ 0.09
TPM4-202ENST00000344824 SZT2Q5T011 3432 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 BTBD18B2RXH4 712 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 ARP10275 920 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 TCF7P36402 384 aaPredicted RBP15.63■□□□□ 0.09
TPM4-202ENST00000344824 NR5A1Q13285 461 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 FAM173BQ6P4H8 233 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 PLA2G4DQ86XP0 818 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 TEX2Q8IWB9 1127 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 WNT8AQ9H1J5 351 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 JPH1Q9HDC5 661 aaPredicted RBP15.63■□□□□ 0.09
TPM4-202ENST00000344824 GTF2IRD1Q9UHL9 959 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 TET1Q8NFU7 2136 aa15.63■□□□□ 0.09
TPM4-202ENST00000344824 H3BRB1 525 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 HOXD8P13378 290 aaPredicted RBP15.62■□□□□ 0.09
TPM4-202ENST00000344824 MARK3P27448 753 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 DEFB128Q7Z7B8 93 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 BLIDQ8IZY5 108 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 CCDC155Q8N6L0 562 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 RETREG2Q8NC44 543 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.62■□□□□ 0.092e-12■■□□□ 12.2
TPM4-202ENST00000344824 C16orf70Q9BSU1 422 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 TUT1Q9H6E5 874 aaKnown RBP15.62■□□□□ 0.09
TPM4-202ENST00000344824 SLC9A2Q9UBY0 812 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 PCDHA4Q9UN74 947 aa15.62■□□□□ 0.09
TPM4-202ENST00000344824 LAMA2P24043 3122 aaKnown RBP15.62■□□□□ 0.09
TPM4-202ENST00000344824 C17orf102A2RUQ5 167 aa15.61■□□□□ 0.09
TPM4-202ENST00000344824 HAS3O00219 553 aa15.61■□□□□ 0.09
TPM4-202ENST00000344824 ZNF200P98182 395 aaPredicted RBP15.61■□□□□ 0.09
TPM4-202ENST00000344824 BFSP2Q13515 415 aa15.61■□□□□ 0.09
TPM4-202ENST00000344824 NPY5RQ15761 445 aa15.61■□□□□ 0.09
TPM4-202ENST00000344824 GLG1Q92896 1179 aa15.61■□□□□ 0.09
TPM4-202ENST00000344824 ZSCAN16Q9H4T2 348 aaPredicted RBP15.61■□□□□ 0.09
TPM4-202ENST00000344824 TCEAL9Q9UHQ7 104 aa15.61■□□□□ 0.09
TPM4-202ENST00000344824 FAM86B1E9PN63 330 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 MAFGO15525 162 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 FAM86B2P0C5J1 330 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 SMIM10L2AP0DMW4 78 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 SMIM10L2BP0DMW5 78 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 NCLP19338 710 aaKnown RBP15.6■□□□□ 0.09
TPM4-202ENST00000344824 SETQ01105 290 aaPredicted RBP15.6■□□□□ 0.09
TPM4-202ENST00000344824 ITGB3BPQ13352 177 aaPredicted RBP15.6■□□□□ 0.09
TPM4-202ENST00000344824 LRIT3Q3SXY7 679 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 PRR16Q569H4 304 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 PSRC1Q6PGN9 363 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms