RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 SLC26A2P50443 739 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 ACTR2P61160 394 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 KRT76Q01546 638 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 NR5A1Q13285 461 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CUL4AQ13619 759 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PIK3AP1Q6ZUJ8 805 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PLPPR4Q7Z2D5 763 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SH3RF1Q7Z6J0 888 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SLC5A5Q92911 643 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 LBHD1Q9BQE6 289 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SMARCAD1Q9H4L7 1026 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PRDM5Q9NQX1 630 aaPredicted RBP14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 ERAP1Q9NZ08 941 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CEP290O15078 2479 aa14.82□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TBX3O15119 743 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SORBS3O60504 671 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 RAG1P15918 1043 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 MAGEA10P43363 369 aaPredicted RBP14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 FAM47CQ5HY64 1035 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 ABHD15Q6UXT9 468 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 AFAP1L1Q8TED9 768 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TNPO1Q92973 898 aaKnown RBP14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 FAM20AQ96MK3 541 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TRPV6Q9H1D0 765 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TSHZ2Q9NRE2 1034 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 DDX25Q9UHL0 483 aaKnown RBP14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TDP2O95551 362 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CCNE2O96020 404 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 RBL2Q08999 1139 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 LETM2Q2VYF4 491 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 MFSD5Q6N075 450 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 RDM1Q8NG50 284 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 ETNPPLQ8TBG4 499 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SNX21Q969T3 373 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 AZI2Q9H6S1 392 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 KCNMB3Q9NPA1 279 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TRMT13Q9NUP7 481 aaKnown RBP14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 HDAC6Q9UBN7 1215 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TCEAL9Q9UHQ7 104 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TELO2Q9Y4R8 837 aa14.81□□□□□ -0.04
HLA-DQA1-201ENST00000343139 NRCAMQ92823 1304 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PSMD10O75832 226 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 GNAT1P11488 350 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 ITGB8P26012 769 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 U2AF2P26368 475 aaKnown RBP eCLIP14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SFNP31947 248 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SP4Q02446 784 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 ORC2Q13416 577 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 EARS2Q5JPH6 523 aaKnown RBP14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 GDF6Q6KF10 455 aaPredicted RBP14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 MIS18BP1Q6P0N0 1132 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 B3GNT9Q6UX72 402 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CAGE1Q8TC20 777 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 INTS4Q96HW7 963 aaKnown RBP14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CTAGE1Q96RT6 745 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PCYT2Q99447 389 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 NOC4LQ9BVI4 516 aaKnown RBP14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 HIPK3Q9H422 1215 aa14.8□□□□□ -0.04
HLA-DQA1-201ENST00000343139 WDR64B1ANS9 1081 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 GAS7O60861 476 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SMIM10L2AP0DMW4 78 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SMIM10L2BP0DMW5 78 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TRAPPC10P48553 1259 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 STAT5BP51692 787 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 JAK3P52333 1124 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PTK7Q13308 1070 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PTGISQ16647 500 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 UTP14CQ5TAP6 766 aaKnown RBP14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 LRCH2Q5VUJ6 765 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CHRDL2Q6WN34 429 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TRIM50Q86XT4 487 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CCDC155Q8N6L0 562 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 GLG1Q92896 1179 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SMC3Q9UQE7 1217 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 NOD1Q9Y239 953 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PCDHA10Q9Y5I2 948 aa14.79□□□□□ -0.04
HLA-DQA1-201ENST00000343139 C17orf102A2RUQ5 167 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CCNT1O60563 726 aaKnown RBP14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 GJB2P29033 226 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 ADAM17P78536 824 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 BFSP2Q13515 415 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 FAM160B1Q5W0V3 765 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 NOSTRINQ8IVI9 506 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SLFN12Q8IYM2 578 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TMEM199Q8N511 208 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 BADQ92934 168 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 TEKT3Q9BXF9 490 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 RNPEPQ9H4A4 650 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 COLQQ9Y215 455 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 MAFBQ9Y5Q3 323 aaPredicted RBP14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 RANBP2P49792 3224 aaKnown RBP14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 MYH7BA7E2Y1 1941 aa14.78□□□□□ -0.04
HLA-DQA1-201ENST00000343139 RRN3P2A6NIE6 340 aa14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 K7ELQ4 463 aaPredicted RBP14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 SLC37A4O43826 429 aa14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 CAND2O75155 1236 aa14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 PARNO95453 639 aaKnown RBP14.77□□□□□ -0.04
HLA-DQA1-201ENST00000343139 RPLP2P05387 115 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms