RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ARP10275 920 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 PSEN2P49810 448 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 MCTP2Q6DN12 878 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 SESTD1Q86VW0 696 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 BICD2Q8TD16 824 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 CTAGE1Q96RT6 745 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 KCNH7Q9NS40 1196 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 PCDHA11Q9Y5I1 949 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 IGLV3-22A0A075B6J6 115 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 FAM86B1E9PN63 330 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 PITPNM1O00562 1244 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 FAM86B2P0C5J1 330 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 FDPSP14324 419 aaKnown RBP17.55■□□□□ 0.4
VAPA-201ENST00000340541 NLRP5P59047 1200 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 MFSD10Q14728 455 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 FAM47CQ5HY64 1035 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 TJAP1Q5JTD0 557 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 FAM177A1Q8N128 213 aaPredicted RBP17.55■□□□□ 0.4
VAPA-201ENST00000340541 DAGLBQ8NCG7 672 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 GIMAP8Q8ND71 665 aaPredicted RBP17.55■□□□□ 0.4
VAPA-201ENST00000340541 ATXN2LQ8WWM7 1075 aaKnown RBP17.55■□□□□ 0.4
VAPA-201ENST00000340541 VWCEQ96DN2 955 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 PRDM12Q9H4Q4 367 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 PKD2L1Q9P0L9 805 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 PCDHA4Q9UN74 947 aa17.55■□□□□ 0.4
VAPA-201ENST00000340541 NOP56O00567 594 aaKnown RBP17.54■□□□□ 0.4
VAPA-201ENST00000340541 LGALS2P05162 132 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 CYP2C9P11712 490 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 ACTN1P12814 892 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 KIAA0753Q2KHM9 967 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 NIPA1Q7RTP0 329 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 NSUN7Q8NE18 718 aaKnown RBP17.54■□□□□ 0.4
VAPA-201ENST00000340541 PHOSPHO2Q8TCD6 241 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 KATNAL1Q9BW62 490 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 AGO4Q9HCK5 861 aaKnown RBP17.54■□□□□ 0.4
VAPA-201ENST00000340541 GJB4Q9NTQ9 266 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 CHD9Q3L8U1 2897 aa17.54■□□□□ 0.4
VAPA-201ENST00000340541 VCANP13611 3396 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 GSTTP1A0A1W2PQM5 241 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
VAPA-201ENST00000340541 CIITAP33076 1130 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 CHMP4BP1P59074 171 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 SP4Q02446 784 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 ITGB3BPQ13352 177 aaPredicted RBP17.53■□□□□ 0.4
VAPA-201ENST00000340541 BFSP2Q13515 415 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 HIC1Q14526 733 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 GDF6Q6KF10 455 aaPredicted RBP17.53■□□□□ 0.4
VAPA-201ENST00000340541 TRIM50Q86XT4 487 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 USP38Q8NB14 1042 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 RETREG2Q8NC44 543 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 SCLYQ96I15 445 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 ALG1Q9BT22 464 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 PHF20Q9BVI0 1012 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 NKX2-4Q9H2Z4 354 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 ORC3Q9UBD5 711 aaPredicted RBP17.53■□□□□ 0.4
VAPA-201ENST00000340541 HDAC6Q9UBN7 1215 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 GTF2IRD1Q9UHL9 959 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 KCNJ14Q9UNX9 436 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 LIMCH1Q9UPQ0 1083 aa17.53■□□□□ 0.4
VAPA-201ENST00000340541 NFASCO94856 1347 aa17.52■□□□□ 0.4
VAPA-201ENST00000340541 MYO9BQ13459 2157 aa17.52■□□□□ 0.4
VAPA-201ENST00000340541 TRIP12Q14669 1992 aaPredicted RBP17.52■□□□□ 0.4
VAPA-201ENST00000340541 H3BRB1 525 aa17.52■□□□□ 0.4
VAPA-201ENST00000340541 JAK2O60674 1132 aa17.52■□□□□ 0.4
VAPA-201ENST00000340541 GALNT17Q6IS24 598 aa17.52■□□□□ 0.4
VAPA-201ENST00000340541 BLIDQ8IZY5 108 aa17.52■□□□□ 0.4
VAPA-201ENST00000340541 LENG9Q96B70 501 aa17.52■□□□□ 0.4
VAPA-201ENST00000340541 TUT1Q9H6E5 874 aaKnown RBP17.52■□□□□ 0.4
VAPA-201ENST00000340541 YBX2Q9Y2T7 364 aaKnown RBP17.52■□□□□ 0.4
VAPA-201ENST00000340541 GTF3C3Q9Y5Q9 886 aa17.52■□□□□ 0.4
VAPA-201ENST00000340541 ZBBXA8MT70 800 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 DHX15O43143 795 aaKnown RBP17.51■□□□□ 0.39
VAPA-201ENST00000340541 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
VAPA-201ENST00000340541 IQCF3P0C7M6 154 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 HOXC8P31273 242 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 TCF7P36402 384 aaPredicted RBP17.51■□□□□ 0.39
VAPA-201ENST00000340541 ZNF76P36508 570 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 ADGRE1Q14246 886 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 PTGISQ16647 500 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 PLA2G4DQ86XP0 818 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 CCDC155Q8N6L0 562 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 C7orf31Q8N865 590 aa17.51■□□□□ 0.39
VAPA-201ENST00000340541 JPH1Q9HDC5 661 aaPredicted RBP17.51■□□□□ 0.39
VAPA-201ENST00000340541 TANC1Q9C0D5 1861 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 POU3F3P20264 500 aaPredicted RBP17.5■□□□□ 0.39
VAPA-201ENST00000340541 RABEP1Q15276 862 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 UTP14CQ5TAP6 766 aaKnown RBP17.5■□□□□ 0.39
VAPA-201ENST00000340541 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 SEPT1Q8WYJ6 367 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 DHX38Q92620 1227 aaKnown RBP17.5■□□□□ 0.39
VAPA-201ENST00000340541 TBC1D32Q96NH3 1257 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 PCYT2Q99447 389 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 SLC9A2Q9UBY0 812 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 NOD1Q9Y239 953 aa17.5■□□□□ 0.39
VAPA-201ENST00000340541 SCN5AQ14524 2016 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 BAIAP3O94812 1187 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 CCNE2O96020 404 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 IGFBP4P22692 258 aa17.49■□□□□ 0.39
VAPA-201ENST00000340541 USP11P51784 963 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms