RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 KLRC1P26715 233 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 FKBP3Q00688 224 aaKnown RBP21.9■■□□□ 1.1
CDCA4-201ENST00000336219 SEPT2Q15019 361 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 SUGP1Q8IWZ8 645 aaKnown RBP21.9■■□□□ 1.1
CDCA4-201ENST00000336219 GJA10Q969M2 543 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 RBM17Q96I25 401 aaKnown RBP21.9■■□□□ 1.1
CDCA4-201ENST00000336219 CAPN7Q9Y6W3 813 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 MYO1FO00160 1098 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 SEC24CP53992 1094 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 ARHGAP27Q6ZUM4 889 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 DNAAF5Q86Y56 855 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 UIMC1Q96RL1 719 aa21.9■■□□□ 1.1
CDCA4-201ENST00000336219 NOL4O94818 638 aa21.89■■□□□ 1.1
CDCA4-201ENST00000336219 LSP1P33241 339 aa21.89■■□□□ 1.1
CDCA4-201ENST00000336219 CUL5Q93034 780 aa21.89■■□□□ 1.1
CDCA4-201ENST00000336219 FGFBP2Q9BYJ0 223 aa21.89■■□□□ 1.1
CDCA4-201ENST00000336219 PANK4Q9NVE7 773 aa21.89■■□□□ 1.1
CDCA4-201ENST00000336219 TBC1D7Q9P0N9 293 aa21.89■■□□□ 1.1
CDCA4-201ENST00000336219 MYH4Q9Y623 1939 aa21.89■■□□□ 1.1
CDCA4-201ENST00000336219 FAM26FQ5R3K3 315 aa21.89■■□□□ 1.09
CDCA4-201ENST00000336219 TTBK2Q6IQ55 1244 aa21.89■■□□□ 1.09
CDCA4-201ENST00000336219 TRAF5O00463 557 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 BBOX1O75936 387 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 POLR2FP61218 127 aaKnown RBP21.88■■□□□ 1.09
CDCA4-201ENST00000336219 GTF2IP78347 998 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 HYIQ5T013 277 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 KLHL7Q8IXQ5 586 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 TBC1D5Q92609 795 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.88■■□□□ 1.09
CDCA4-201ENST00000336219 LSM14BQ9BX40 385 aaKnown RBP21.88■■□□□ 1.09
CDCA4-201ENST00000336219 GOLPH3Q9H4A6 298 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 DDX4Q9NQI0 724 aaKnown RBP21.88■■□□□ 1.09
CDCA4-201ENST00000336219 CEP72Q9P209 647 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 PCDHA12Q9UN75 941 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 LTBP1Q14766 1721 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 THSD7AQ9UPZ6 1657 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 C10orf71Q711Q0 1435 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 RBAK-RBAKDNI3L0D1 243 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 MRPL12P52815 198 aaKnown RBP21.88■■□□□ 1.09
CDCA4-201ENST00000336219 CCDC40Q4G0X9 1142 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 MCTP2Q6DN12 878 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 ATAD5Q96QE3 1844 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 KDM3AQ9Y4C1 1321 aa21.88■■□□□ 1.09
CDCA4-201ENST00000336219 GCFC2P16383 781 aaKnown RBP21.87■■□□□ 1.09
CDCA4-201ENST00000336219 PAK2Q13177 524 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 GLE1Q53GS7 698 aaKnown RBP21.87■■□□□ 1.09
CDCA4-201ENST00000336219 FAM83BQ5T0W9 1011 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 C6orf229H3BNL8 230 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 RAD51CO43502 376 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 MARCH6O60337 910 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 NR1D1P20393 614 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 SFMBT2Q5VUG0 894 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 NAA35Q5VZE5 725 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 KDM7AQ6ZMT4 941 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 RNF10Q8N5U6 811 aaKnown RBP21.87■■□□□ 1.09
CDCA4-201ENST00000336219 SYN2Q92777 582 aaPredicted RBP21.87■■□□□ 1.09
CDCA4-201ENST00000336219 NT5C3AQ9H0P0 336 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 NUCKS1Q9H1E3 243 aaKnown RBP21.87■■□□□ 1.09
CDCA4-201ENST00000336219 BMP2KQ9NSY1 1161 aaPredicted RBP21.87■■□□□ 1.09
CDCA4-201ENST00000336219 SERPINB13Q9UIV8 391 aa21.87■■□□□ 1.09
CDCA4-201ENST00000336219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.86■■□□□ 1.09
CDCA4-201ENST00000336219 SERPINB2P05120 415 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 SLC16A2P36021 539 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 SLC9C1Q4G0N8 1177 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 CEP63Q96MT8 703 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 CENPHQ9H3R5 247 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 GREB1LQ9C091 1923 aaPredicted RBP21.86■■□□□ 1.09
CDCA4-201ENST00000336219 A0A087X0T9 212 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 ZBTB5O15062 677 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 SSBP05455 408 aaKnown RBP eCLIP21.86■■□□□ 1.09
CDCA4-201ENST00000336219 FAM228BP0C875 321 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 MNAT1P51948 309 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 GPATCH4Q5T3I0 446 aaKnown RBP21.86■■□□□ 1.09
CDCA4-201ENST00000336219 OR2W6PQ8NHA6 318 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 PSTPIP2Q9H939 334 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 SWAP70Q9UH65 585 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 PCDHA2Q9Y5H9 948 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 MYO3BQ8WXR4 1341 aa21.86■■□□□ 1.09
CDCA4-201ENST00000336219 USP17L10C9JJH3 530 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 E9PMD0 336 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 SERPING1P05155 500 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 ADRA2BP18089 450 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 HPDP32754 393 aaPredicted RBP21.85■■□□□ 1.09
CDCA4-201ENST00000336219 HDLBPQ00341 1268 aaKnown RBP21.85■■□□□ 1.09
CDCA4-201ENST00000336219 RAPGEF1Q13905 1077 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 MAATS1Q7Z4T9 603 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 NELFCDQ8IXH7 590 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 OTUD6BQ8N6M0 293 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 ZNF473Q8WTR7 871 aaKnown RBP21.85■■□□□ 1.09
CDCA4-201ENST00000336219 ADAMTS1Q9UHI8 967 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 LRRC37AA6NMS7 1700 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 GYS1P13807 737 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 SHMT1P34896 483 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 MARSP56192 900 aaKnown RBP21.85■■□□□ 1.09
CDCA4-201ENST00000336219 CACNB1Q02641 598 aaPredicted RBP21.85■■□□□ 1.09
CDCA4-201ENST00000336219 NAB2Q15742 525 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 MEI1Q5TIA1 1274 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 TRIM59Q8IWR1 403 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 FAM133AQ8N9E0 248 aa21.85■■□□□ 1.09
CDCA4-201ENST00000336219 INPP4AQ96PE3 977 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms