RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 GOLGA8BA8MQT2 603 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 RSPH10B2B2RC85 870 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 PARNO95453 639 aaKnown RBP14.18□□□□□ -0.14
TPM3-204ENST00000323144 RSPH10BP0C881 870 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 KCNQ1P51787 676 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 RTN1Q16799 776 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 PLEKHG4Q58EX7 1191 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 NLRX1Q86UT6 975 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 MYOCDQ8IZQ8 938 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 FANCBQ8NB91 859 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 ATXN2LQ8WWM7 1075 aaKnown RBP14.18□□□□□ -0.14
TPM3-204ENST00000323144 GPRASP2Q96D09 838 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 ZBTB10Q96DT7 871 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 ZBED2Q9BTP6 218 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 UBIAD1Q9Y5Z9 338 aa14.18□□□□□ -0.14
TPM3-204ENST00000323144 KLF18A0A0U1RQI7 1052 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 SPDYE3A6NKU9 549 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 STXBP3O00186 592 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 NAPAP54920 295 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 ADAM17P78536 824 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 MTMR1Q13613 665 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 SKIV2LQ15477 1246 aaKnown RBP14.17□□□□□ -0.14
TPM3-204ENST00000323144 XRRA1Q6P2D8 792 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 TMTC2Q8N394 836 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 SYMPKQ92797 1274 aaKnown RBP14.17□□□□□ -0.14
TPM3-204ENST00000323144 NEK1Q96PY6 1258 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 SENP7Q9BQF6 1050 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 USP26Q9BXU7 913 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 TMEM260Q9NX78 707 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 PCDHA6Q9UN73 950 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 PCDHA8Q9Y5H6 950 aa14.17□□□□□ -0.14
TPM3-204ENST00000323144 GSTTP1A0A1W2PQM5 241 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 KIF28PB7ZC32 967 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 ADAMTS3O15072 1205 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 ZBTB43O43298 467 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 GTPBP6O43824 516 aaPredicted RBP14.16□□□□□ -0.14
TPM3-204ENST00000323144 CDC27P30260 824 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 MRPS5P82675 430 aaKnown RBP14.16□□□□□ -0.14
TPM3-204ENST00000323144 EXOSC10Q01780 885 aaKnown RBP14.16□□□□□ -0.14
TPM3-204ENST00000323144 PPFIA1Q13136 1202 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 IKBKEQ14164 716 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 RNF20Q5VTR2 975 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 PPP1R18Q6NYC8 613 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 C17orf80Q9BSJ5 609 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 ANO3Q9BYT9 981 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 FAM217BQ9NTX9 383 aaPredicted RBP14.16□□□□□ -0.14
TPM3-204ENST00000323144 RBM28Q9NW13 759 aaKnown RBP14.16□□□□□ -0.14
TPM3-204ENST00000323144 NID2Q14112 1375 aa14.16□□□□□ -0.14
TPM3-204ENST00000323144 PLXNA4Q9HCM2 1894 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.15□□□□□ -0.14
TPM3-204ENST00000323144 EFCAB14O75071 495 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 CAND2O75155 1236 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 GHRP10912 638 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 POU3F3P20264 500 aaPredicted RBP14.15□□□□□ -0.14
TPM3-204ENST00000323144 ADCY7P51828 1080 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 MGAT3Q09327 533 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 GRIK4Q16099 956 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 CYP2W1Q8TAV3 490 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 UHRF1Q96T88 793 aaPredicted RBP14.15□□□□□ -0.14
TPM3-204ENST00000323144 PCYT2Q99447 389 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 JADE2Q9NQC1 790 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 TUBE1Q9UJT0 475 aa14.15□□□□□ -0.14
TPM3-204ENST00000323144 TNFRSF10AO00220 468 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 AMHP03971 560 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 ERVK-21P61565 698 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 IGBP1P78318 339 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 HTRA4P83105 476 aaPredicted RBP14.14□□□□□ -0.15
TPM3-204ENST00000323144 APOBRQ0VD83 1088 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
TPM3-204ENST00000323144 DHX32Q7L7V1 743 aaKnown RBP14.14□□□□□ -0.15
TPM3-204ENST00000323144 SP7Q8TDD2 431 aaPredicted RBP14.14□□□□□ -0.15
TPM3-204ENST00000323144 TRAPPC12Q8WVT3 735 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 SEPT8Q92599 483 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 CDHR1Q96JP9 859 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 TGS1Q96RS0 853 aaKnown RBP14.14□□□□□ -0.15
TPM3-204ENST00000323144 RAD9AQ99638 391 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 SUGCTQ9HAC7 445 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 JPH1Q9HDC5 661 aaPredicted RBP14.14□□□□□ -0.15
TPM3-204ENST00000323144 RIC8AQ9NPQ8 531 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 NAP1L2Q9ULW6 460 aaPredicted RBP14.14□□□□□ -0.15
TPM3-204ENST00000323144 NRCAMQ92823 1304 aa14.14□□□□□ -0.15
TPM3-204ENST00000323144 BRWD1Q9NSI6 2320 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 MYH9P35579 1960 aaKnown RBP14.13□□□□□ -0.15
TPM3-204ENST00000323144 CHRNA1P02708 482 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 ARP10275 920 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 CLK2P49760 499 aaKnown RBP14.13□□□□□ -0.15
TPM3-204ENST00000323144 MARCH8Q5T0T0 291 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 SYNE3Q6ZMZ3 975 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 GIMAP8Q8ND71 665 aaPredicted RBP14.13□□□□□ -0.15
TPM3-204ENST00000323144 LINC01599Q8WXQ3 324 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 MXRA8Q9BRK3 442 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 IFIH1Q9BYX4 1025 aaKnown RBP14.13□□□□□ -0.15
TPM3-204ENST00000323144 EHMT1Q9H9B1 1298 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 KCNH7Q9NS40 1196 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 BARHL2Q9NY43 387 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 ERAP1Q9NZ08 941 aa14.13□□□□□ -0.15
TPM3-204ENST00000323144 MBLAC1A4D2B0 266 aaPredicted RBP14.12□□□□□ -0.15
TPM3-204ENST00000323144 DDX39AO00148 427 aaKnown RBP14.12□□□□□ -0.15
TPM3-204ENST00000323144 PPFIA3O75145 1194 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 UPP2O95045 317 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms