RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 SPP2Q13103 211 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CCDC121Q6ZUS5 278 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SESTD1Q86VW0 696 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RASSF4Q9H2L5 321 aa13.98□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SURF1Q15526 300 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 C16orf86Q6ZW13 317 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SND1Q7KZF4 910 aaKnown RBP eCLIP13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 MXRA7P84157 204 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SARM1Q6SZW1 724 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CCDC170Q8IYT3 715 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 EPB41L4AQ9HCS5 686 aaPredicted RBP13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PLCB1Q9NQ66 1216 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ZDHHC9Q9Y397 364 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GOLGA6CA6NDK9 693 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GOLGA6DP0CG33 693 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 HPDP32754 393 aaPredicted RBP13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 TAOK1Q7L7X3 1001 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 TCP11Q8WWU5 503 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 NLRP7Q8WX94 980 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 FAM167AQ96KS9 214 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PANX2Q96RD6 677 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GOLGA6AQ9NYA3 693 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 COL5A2P05997 1499 aaPredicted RBP13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 KRT31Q15323 416 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SLFN12LQ6IEE8 588 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CDC42EP5Q6NZY7 148 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ZBTB9Q96C00 473 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GDAQ9Y2T3 454 aa13.97□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CAPN9O14815 690 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 MXI1P50539 228 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GOLGA8FQ08AF8 430 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GOLGA8DPQ0D2H9 430 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 MB21D1Q8N884 522 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RSAD2Q8WXG1 361 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 FAM170AA1A519 330 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 CHGBP05060 677 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SFNP31947 248 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SEMA3FQ13275 785 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 SLC10A5Q5PT55 438 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 RSBN1LQ6PCB5 846 aaPredicted RBP13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ITIH3Q06033 890 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 C10orf76Q5T2E6 689 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PROM2Q8N271 834 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 PIGOQ8TEQ8 1089 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 ATP6V0A4Q9HBG4 840 aa13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 DDX41Q9UJV9 622 aaKnown RBP13.96□□□□□ -0.17
SH3PXD2A-201ENST00000315994 GUCY1A2P33402 732 aa13.96□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SCYL2Q6P3W7 929 aa13.96□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MCPH1Q8NEM0 835 aa13.96□□□□□ -0.18
SH3PXD2A-201ENST00000315994 APOL6Q9BWW8 343 aa13.96□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TRIM7Q9C029 511 aa13.96□□□□□ -0.18
SH3PXD2A-201ENST00000315994 BIRC2Q13490 618 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 FBF1Q8TES7 1133 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MXD3Q9BW11 206 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SERPING1P05155 500 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 FAM133AQ8N9E0 248 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PHF20Q9BVI0 1012 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 THAP12O43422 761 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 RNF8O76064 485 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ZNF543Q08ER8 600 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SETDB1Q15047 1291 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 LGSNQ5TDP6 509 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 HAUS1Q96CS2 278 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 KAZALD1Q96I82 304 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PHLPP2Q6ZVD8 1323 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 COPB2P35606 906 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PEX3P56589 373 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PPFIA1Q13136 1202 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TRIM50Q86XT4 487 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MICALL2Q8IY33 904 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ANKRD13CQ8N6S4 541 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 UBE2TQ9NPD8 197 aaPredicted RBP13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 E9PMD0 336 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 K7ERI5 159 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 DENND2CQ68D51 928 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SLC35F6Q8N357 371 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 RUNDC3BQ96NL0 473 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SMC6Q96SB8 1091 aa13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 NHEJ1Q9H9Q4 299 aaPredicted RBP13.95□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MYO1FO00160 1098 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 LDHAP00338 332 aaKnown RBP13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ATP1A3P13637 1013 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ANTXR2P58335 489 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PTPN21Q16825 1174 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PADI6Q6TGC4 694 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 DYDC2Q96IM9 177 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 CDC23Q9UJX2 597 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ANAPC4Q9UJX5 808 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SERPINA10Q9UK55 444 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ADGRB2O60241 1585 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 GPR75-ASB3A0A0A6YYF3 556 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 P4HBP07237 508 aaKnown RBP13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TFAMQ00059 246 aaKnown RBP13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 EHHADHQ08426 723 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms