RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CCNE1P24864 410 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 IREB2P48200 963 aaKnown RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 PMS1P54277 932 aaKnown RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 ARID5BQ14865 1188 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 TPD52L1Q16890 204 aaPredicted RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 TKFCQ3LXA3 575 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 RNF207Q6ZRF8 634 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 NOC3LQ8WTT2 800 aaKnown RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 P2RX5Q93086 422 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 RIT2Q99578 217 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 EIF2AK1Q9BQI3 630 aaKnown RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 THAP9Q9H5L6 903 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 TUFT1Q9NNX1 390 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 SPTLC3Q9NUV7 552 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 ADD3Q9UEY8 706 aaKnown RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 RIPK3Q9Y572 518 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 LRRC37A2A6NM11 1700 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 ARID2Q68CP9 1835 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 BICDL2A1A5D9 508 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 FRMD3A2A2Y4 597 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 GAS7O60861 476 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 CYP11B2P19099 503 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 MRPS9P82933 396 aaKnown RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 CCZ1BP86790 482 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 CCZ1P86791 482 aaPredicted RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 COASYQ13057 564 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 TBX2Q13207 712 aaPredicted RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 TMEM132BQ14DG7 1078 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 SNRNP48Q6IEG0 339 aaKnown RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 FOXR2Q6PJQ5 311 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 GPBP1Q86WP2 473 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 SYT2Q8N9I0 419 aaPredicted RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 TAAR1Q96RJ0 339 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 HSD17B14Q9BPX1 270 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 ZNF577Q9BSK1 485 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 TEKT3Q9BXF9 490 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 JADE2Q9NQC1 790 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 PXMP2Q9NR77 195 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
TRIM40-205ENST00000307859 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
TRIM40-205ENST00000307859 IPO5O00410 1097 aaKnown RBP13.23□□□□□ -0.29
TRIM40-205ENST00000307859 COBLO75128 1261 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 NF2P35240 595 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 PBX1P40424 430 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 PPATQ06203 517 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 PGM5Q15124 567 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 KRT31Q15323 416 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 TCP11X2Q5H9J9 407 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 CENPPQ6IPU0 288 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 IRF2BP1Q8IU81 584 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 GUF1Q8N442 669 aaKnown RBP13.23□□□□□ -0.29
TRIM40-205ENST00000307859 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 HPS3Q969F9 1004 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 DUSP9Q99956 384 aaKnown RBP13.23□□□□□ -0.29
TRIM40-205ENST00000307859 PDCD2LQ9BRP1 358 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 DNM3Q9UQ16 869 aa13.23□□□□□ -0.29
TRIM40-205ENST00000307859 ZNFX1Q9P2E3 1918 aaKnown RBP13.23□□□□□ -0.29
TRIM40-205ENST00000307859 MYH9P35579 1960 aaKnown RBP13.23□□□□□ -0.29
TRIM40-205ENST00000307859 A0A0G2JLL6 359 aaPredicted RBP13.22□□□□□ -0.29
TRIM40-205ENST00000307859 SPDYE5A6NIY4 337 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 KCNJ18B7U540 433 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 EYA4O95677 639 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM40-205ENST00000307859 IDEP14735 1019 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 PSMC6P62333 389 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 KCNJ12Q14500 433 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 NOLC1Q14978 699 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRIM40-205ENST00000307859 FILIP1LQ4L180 1135 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 ARSHQ5FYA8 562 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 SPECC1LQ69YQ0 1117 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 XRRA1Q6P2D8 792 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 PRRT2Q7Z6L0 340 aaPredicted RBP13.22□□□□□ -0.29
TRIM40-205ENST00000307859 ERO1BQ86YB8 467 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 CCDC65Q8IXS2 484 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 ANKRD13AQ8IZ07 590 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 PROCA1Q8NCQ7 364 aaPredicted RBP13.22□□□□□ -0.29
TRIM40-205ENST00000307859 NEK9Q8TD19 979 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
TRIM40-205ENST00000307859 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 RMDN3Q96TC7 470 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 UNC45AQ9H3U1 944 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 AGO4Q9HCK5 861 aaKnown RBP13.22□□□□□ -0.29
TRIM40-205ENST00000307859 SLC39A2Q9NP94 309 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 KCNH7Q9NS40 1196 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 PANK4Q9NVE7 773 aa13.22□□□□□ -0.29
TRIM40-205ENST00000307859 SLITRK3O94933 977 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 EIF2AK2P19525 551 aaKnown RBP13.21□□□□□ -0.29
TRIM40-205ENST00000307859 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.29
TRIM40-205ENST00000307859 EEF1GP26641 437 aaKnown RBP13.21□□□□□ -0.29
TRIM40-205ENST00000307859 COPB1P53618 953 aaKnown RBP13.21□□□□□ -0.29
TRIM40-205ENST00000307859 CYP4A11Q02928 519 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 BAATQ14032 418 aaPredicted RBP13.21□□□□□ -0.29
TRIM40-205ENST00000307859 EPHA7Q15375 998 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 TREML2Q5T2D2 321 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 ANKRD40Q6AI12 368 aa13.21□□□□□ -0.29
TRIM40-205ENST00000307859 NSMFQ6X4W1 530 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms