RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 RHOT2Q8IXI1 618 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TTC13Q8NBP0 860 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SSH3Q8TE77 659 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 DCAF4Q8WV16 495 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 RBM41Q96IZ5 413 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 NDEL1Q9GZM8 345 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PRDM10Q9NQV6 1147 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 POLR3EQ9NVU0 708 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KCNJ14Q9UNX9 436 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 RPLP2P05387 115 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SCP2P22307 547 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MAPK4P31152 587 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TTLL4Q14679 1199 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ARL6IP4Q66PJ3 421 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KCNV1Q6PIU1 500 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 RAPH1Q70E73 1250 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 APOBEC3FQ8IUX4 373 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ANKRD42Q8N9B4 389 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 FSD1LQ9BXM9 530 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 RPF1Q9H9Y2 349 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 HOXC10Q9NYD6 342 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KIAA0391O15091 583 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 RPN1P04843 607 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SAT1P21673 171 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 TRIM67Q6ZTA4 783 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 LRRC47Q8N1G4 583 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 FBXO18Q8NFZ0 1043 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SUCLG2Q96I99 432 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MSTO1Q9BUK6 570 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 QTRT2Q9H974 415 aaKnown RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PCDHA4Q9UN74 947 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SPTA1P02549 2419 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 IQANK1A0A1B0GTG1 560 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KIF28PB7ZC32 967 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 OCM2P0CE71 109 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 OCMP0CE72 109 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-201ENST00000283254 EPHB4P54760 987 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SGO2Q562F6 1265 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 RNF207Q6ZRF8 634 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 MIGA2Q7L4E1 593 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 NEK9Q8TD19 979 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 WHAMMQ8TF30 809 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PPP1R2P1Q96PQ5 205 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 ASPSCR1Q9BZE9 553 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 COA1Q9GZY4 146 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 PIDD1Q9HB75 910 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 DYRK4Q9NR20 520 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 SH3GLB2Q9NR46 395 aa4.38□□□□□ -1.71
SCN3A-201ENST00000283254 KRT87PA6NCN2 255 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 EFCAB8A8MWE9 144 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 GOLGA8TH3BQL2 631 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 IGHDP01880 384 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 GOLGA8HP0CJ92 632 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 IL13P35225 146 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 AP3M2P53677 418 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TMED2Q15363 201 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 MAN2A1Q16706 1144 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SYDE2Q5VT97 1194 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 DCLK2Q8N568 766 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 PDCD7Q8N8D1 485 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 KCTD6Q8NC69 237 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 NSUN6Q8TEA1 469 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 ZNF594Q96JF6 807 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 KRT82Q9NSB4 513 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 PIM2Q9P1W9 311 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 STX18Q9P2W9 335 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 RGS12O14924 1447 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CTTNBP2Q8WZ74 1663 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SGK1O00141 431 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 PHKG2P15735 406 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SOX5P35711 763 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 EIF4A1P60842 406 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 OCRLQ01968 901 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CUL1Q13616 776 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TWF2Q6IBS0 349 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 PDXDC2PQ6P474 469 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 ARHGEF25Q86VW2 580 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 YAF2Q8IY57 180 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TMCO5AQ8N6Q1 288 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SNX19Q92543 992 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 ADGRL3Q9HAR2 1447 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 EFCAB6Q5THR3 1501 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CFAP99D6REC4 459 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TBXAS1P24557 533 aaPredicted RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SDC4P31431 198 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 GYG1P46976 350 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 RASSF7Q02833 373 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 NCAPD2Q15021 1401 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 MAGI2Q86UL8 1455 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 RNF217Q8TC41 542 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 ORAI2Q96SN7 254 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TRAIPQ9BWF2 469 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 CALN1Q9BXU9 219 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 C2orf40Q9H1Z8 148 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 SNX14Q9Y5W7 946 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 TCOF1Q13428 1488 aaKnown RBP4.37□□□□□ -1.71
SCN3A-201ENST00000283254 EXOC1LA0A1B0GW35 172 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 A0A1B0GW55 424 aa4.37□□□□□ -1.71
SCN3A-201ENST00000283254 USP17L3A6NCW0 530 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms