RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 URB2Q14146 1524 aaKnown RBP7.42□□□□□ -1.22
TRA2B-201ENST00000259043 SOD2P04179 222 aa7.41□□□□□ -1.22
TRA2B-201ENST00000259043 SARSP49591 514 aaKnown RBP7.41□□□□□ -1.22
TRA2B-201ENST00000259043 SUMO1P63165 101 aaKnown RBP7.41□□□□□ -1.22
TRA2B-201ENST00000259043 SOGA3Q5TF21 947 aa7.41□□□□□ -1.22
TRA2B-201ENST00000259043 MAMDC2Q7Z304 686 aaPredicted RBP7.41□□□□□ -1.22
TRA2B-201ENST00000259043 STK32CQ86UX6 486 aa7.41□□□□□ -1.22
TRA2B-201ENST00000259043 TTLL11Q8NHH1 800 aa7.41□□□□□ -1.22
TRA2B-201ENST00000259043 UHMK1Q8TAS1 419 aaKnown RBP7.41□□□□□ -1.22
TRA2B-201ENST00000259043 SREK1Q8WXA9 508 aaKnown RBP7.41□□□□□ -1.22
TRA2B-201ENST00000259043 CLEC4DQ8WXI8 215 aa7.41□□□□□ -1.22
TRA2B-201ENST00000259043 PTPRN2Q92932 1015 aa7.41□□□□□ -1.22
TRA2B-201ENST00000259043 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
TRA2B-201ENST00000259043 NGRNQ9NPE2 291 aaKnown RBP7.41□□□□□ -1.22
TRA2B-201ENST00000259043 KRIT1O00522 736 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 SLC27A2O14975 620 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 NKRFO15226 690 aaKnown RBP eCLIP7.4□□□□□ -1.22
TRA2B-201ENST00000259043 DPH6Q7L8W6 267 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 PROSER1Q86XN7 944 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 SLC16A11Q8NCK7 471 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 SAMD11Q96NU1 681 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 DNAJC7Q99615 494 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 CDC6Q99741 560 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 DHRS4Q9BTZ2 278 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 IPPKQ9H8X2 491 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 MRPS23Q9Y3D9 190 aaKnown RBP7.4□□□□□ -1.22
TRA2B-201ENST00000259043 TELO2Q9Y4R8 837 aa7.4□□□□□ -1.22
TRA2B-201ENST00000259043 WIZO95785 1651 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 WNT9AO14904 365 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 MAFKO60675 156 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 COL6A2P12110 1019 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 ZNF20P17024 532 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 RPL13P26373 211 aaKnown RBP7.39□□□□□ -1.23
TRA2B-201ENST00000259043 NKX3-2P78367 333 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 TTLL7Q6ZT98 887 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 ZNF761Q86XN6 746 aaPredicted RBP7.39□□□□□ -1.23
TRA2B-201ENST00000259043 RBM12BQ8IXT5 1001 aaKnown RBP7.39□□□□□ -1.23
TRA2B-201ENST00000259043 TTLL6Q8N841 843 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 PMFBP1Q8TBY8 1022 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 SRPK1Q96SB4 655 aaKnown RBP7.39□□□□□ -1.23
TRA2B-201ENST00000259043 KCNJ15Q99712 375 aa7.39□□□□□ -1.23
TRA2B-201ENST00000259043 CFTRP13569 1480 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 TCRBV5S4A2TA0A5A2 114 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 FAM47E-STBD1D6RA91 191 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 SMARCA5O60264 1052 aaPredicted RBP7.38□□□□□ -1.23
TRA2B-201ENST00000259043 FSHBP01225 129 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 LTFP02788 710 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 GNAT1P11488 350 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 SH3RF2Q8TEC5 729 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 DNAJC2Q99543 621 aaKnown RBP7.38□□□□□ -1.23
TRA2B-201ENST00000259043 YIPF4Q9BSR8 244 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 PRDM2Q13029 1718 aa7.38□□□□□ -1.23
TRA2B-201ENST00000259043 ZNF608Q9ULD9 1512 aaPredicted RBP7.37□□□□□ -1.23
TRA2B-201ENST00000259043 ARVCFO00192 962 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 AQP7O14520 342 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 PLATP00750 562 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 EPHA5P54756 1037 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 GABREP78334 506 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 SPIRE1Q08AE8 756 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 ZC3H12BQ5HYM0 836 aaKnown RBP7.37□□□□□ -1.23
TRA2B-201ENST00000259043 TRIM48Q8IWZ4 208 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 ADAMTS17Q8TE56 1095 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 LOXL4Q96JB6 756 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 C8orf49Q96NF6 230 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 SORCS2Q96PQ0 1159 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 ALG1Q9BT22 464 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 RBPJLQ9UBG7 517 aa7.37□□□□□ -1.23
TRA2B-201ENST00000259043 ARAP1Q96P48 1450 aa7.36□□□□□ -1.23
TRA2B-201ENST00000259043 TUSC3Q13454 348 aa7.36□□□□□ -1.23
TRA2B-201ENST00000259043 LILRB2Q8N423 598 aa7.36□□□□□ -1.23
TRA2B-201ENST00000259043 PCDH19Q8TAB3 1148 aa7.36□□□□□ -1.23
TRA2B-201ENST00000259043 OSBPL2Q9H1P3 480 aa7.36□□□□□ -1.23
TRA2B-201ENST00000259043 PCDHA8Q9Y5H6 950 aa7.36□□□□□ -1.23
TRA2B-201ENST00000259043 ZNF28P17035 718 aa7.35□□□□□ -1.23
TRA2B-201ENST00000259043 GRIN1Q05586 938 aa7.35□□□□□ -1.23
TRA2B-201ENST00000259043 PAK1Q13153 545 aa7.35□□□□□ -1.23
TRA2B-201ENST00000259043 TBC1D10BQ4KMP7 808 aaPredicted RBP7.35□□□□□ -1.23
TRA2B-201ENST00000259043 TRIM61Q5EBN2 209 aa7.35□□□□□ -1.23
TRA2B-201ENST00000259043 CYB5RLQ6IPT4 315 aa7.35□□□□□ -1.23
TRA2B-201ENST00000259043 MTDHQ86UE4 582 aaKnown RBP7.35□□□□□ -1.23
TRA2B-201ENST00000259043 GSTCDQ8NEC7 633 aa7.35□□□□□ -1.23
TRA2B-201ENST00000259043 DSEQ9UL01 958 aa7.35□□□□□ -1.23
TRA2B-201ENST00000259043 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.34□□□□□ -1.23
TRA2B-201ENST00000259043 FAHP16930 419 aa7.34□□□□□ -1.23
TRA2B-201ENST00000259043 PAN2Q504Q3 1202 aaKnown RBP7.34□□□□□ -1.23
TRA2B-201ENST00000259043 KCTD1Q719H9 257 aa7.34□□□□□ -1.23
TRA2B-201ENST00000259043 THAP3Q8WTV1 239 aaPredicted RBP7.34□□□□□ -1.23
TRA2B-201ENST00000259043 ZSWIM3Q96MP5 696 aa7.34□□□□□ -1.23
TRA2B-201ENST00000259043 IPO9Q96P70 1041 aaKnown RBP7.34□□□□□ -1.23
TRA2B-201ENST00000259043 SLC52A2Q9HAB3 445 aa7.34□□□□□ -1.23
TRA2B-201ENST00000259043 CDK11AQ9UQ88 783 aaPredicted RBP7.34□□□□□ -1.23
TRA2B-201ENST00000259043 PCDHA9Q9Y5H5 950 aa7.34□□□□□ -1.23
TRA2B-201ENST00000259043 ACOT7O00154 380 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 CRTAMO95727 393 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 AMY2AP04746 511 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 AMY2BP19961 511 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 GUCY1A3Q02108 690 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 C2orf27AQ580R0 203 aa7.33□□□□□ -1.24
TRA2B-201ENST00000259043 FAM26FQ5R3K3 315 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms