RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 C3orf67Q6ZVT6 689 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 BRSK2Q8IWQ3 736 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 ZNF280CQ8ND82 737 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 DEPTORQ8TB45 409 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 E2F7Q96AV8 911 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 HAUS4Q9H6D7 363 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 DDX18Q9NVP1 670 aaKnown RBP8.3□□□□□ -1.08
USP29-201ENST00000254181 CUEDC1Q9NWM3 386 aaPredicted RBP8.3□□□□□ -1.08
USP29-201ENST00000254181 TRIM10Q9UDY6 481 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 RCOR1Q9UKL0 485 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 SMARCA4P51532 1647 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 PDLIM1O00151 329 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 FOXN3O00409 490 aaPredicted RBP8.3□□□□□ -1.08
USP29-201ENST00000254181 MAP3K7O43318 606 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 LILRB3O75022 631 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 ZPR1O75312 459 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 SARSP49591 514 aaKnown RBP8.3□□□□□ -1.08
USP29-201ENST00000254181 PEX5P50542 639 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 ITIH3Q06033 890 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 PPARAQ07869 468 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 BNIP1Q12981 228 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 RESTQ13127 1097 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 SESTD1Q86VW0 696 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 ANKRD42Q8N9B4 389 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 OR2W6PQ8NHA6 318 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 LRRC45Q96CN5 670 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 RAB17Q9H0T7 212 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 NDST4Q9H3R1 872 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 MAGI2Q86UL8 1455 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 PRMT3O60678 531 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 NBNO60934 754 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 ATF3P18847 181 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 TNFAIP3P21580 790 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 S100A1P23297 94 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 CYLC1P35663 651 aaPredicted RBP8.3□□□□□ -1.08
USP29-201ENST00000254181 HALP42357 657 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 PKN1Q16512 942 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 LACTB2Q53H82 288 aaPredicted RBP8.3□□□□□ -1.08
USP29-201ENST00000254181 ADALQ6DHV7 355 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 C6orf89Q6UWU4 347 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 MIGA2Q7L4E1 593 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 UCMAQ8WVF2 138 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 C8orf48Q96LL4 319 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 PARVBQ9HBI1 364 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 ARNT2Q9HBZ2 717 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 GPHNQ9NQX3 736 aaPredicted RBP8.3□□□□□ -1.08
USP29-201ENST00000254181 INTS9Q9NV88 658 aaKnown RBP8.3□□□□□ -1.08
USP29-201ENST00000254181 SPO11Q9Y5K1 396 aa8.3□□□□□ -1.08
USP29-201ENST00000254181 WDR46O15213 610 aaKnown RBP8.29□□□□□ -1.08
USP29-201ENST00000254181 TMEM127O75204 238 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 EPB41P11171 864 aaKnown RBP8.29□□□□□ -1.08
USP29-201ENST00000254181 PHBP35232 272 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 PDXDC2PQ6P474 469 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 KLHL7Q8IXQ5 586 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 AENQ8WTP8 325 aaKnown RBP8.29□□□□□ -1.08
USP29-201ENST00000254181 NELFBQ8WX92 580 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 CCT6BQ92526 530 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 SKA1Q96BD8 255 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 EPSTI1Q96J88 318 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 VPS33BQ9H267 617 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP29-201ENST00000254181 MOSPD1Q9UJG1 213 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 EPN1Q9Y6I3 576 aaPredicted RBP8.29□□□□□ -1.08
USP29-201ENST00000254181 ARPC4-TTLL3A0A0A6YYG9 625 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 TMEM238LA0A1B0GVL6 79 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 TMEM221A6NGB7 291 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 TTLL13PA6NNM8 815 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 GOLGA8AA7E2F4 631 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 TRAPPC3O43617 180 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 ORC4O43929 436 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 ITGA2BP08514 1039 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 CNPY1Q3B7I2 92 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 MLKLQ8NB16 471 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 HDAC7Q8WUI4 952 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 SLC39A13Q96H72 371 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 C9orf78Q9NZ63 289 aaPredicted RBP8.29□□□□□ -1.08
USP29-201ENST00000254181 SEPT10Q9P0V9 454 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 CIDEBQ9UHD4 219 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 RBMX2Q9Y388 322 aaKnown RBP8.29□□□□□ -1.08
USP29-201ENST00000254181 COMMD3-BMI1R4GMX3 469 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 CFAP43Q8NDM7 1665 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
USP29-201ENST00000254181 FAM25EA8MYX2 175 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 MAP3K13O43283 966 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 VAMP4O75379 141 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 KRT16P08779 473 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 EPB42P16452 691 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 INHBCP55103 352 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 CYTH1Q15438 398 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 RAB3IL1Q8TBN0 382 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 MDM1Q8TC05 714 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 IQCDQ96DY2 449 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 FBXO2Q9UK22 296 aaPredicted RBP8.29□□□□□ -1.08
USP29-201ENST00000254181 TRIM33Q9UPN9 1127 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 LRCH1Q9Y2L9 728 aa8.29□□□□□ -1.08
USP29-201ENST00000254181 FAM170AA1A519 330 aa8.28□□□□□ -1.08
USP29-201ENST00000254181 CHL1O00533 1208 aa8.28□□□□□ -1.08
USP29-201ENST00000254181 PPIP5K2O43314 1243 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms