RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 IFT81Q8WYA0 676 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 LARP4BQ92615 738 aaKnown RBP10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 OSBPL9Q96SU4 736 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 NYXQ9GZU5 481 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 MAGEF1Q9HAY2 307 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 TACC1O75410 805 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 AP1G2O75843 785 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 HNRNPH3P31942 346 aaKnown RBP10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 PPP4CP60510 307 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 KCNMA1Q12791 1236 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 CALCRLQ16602 461 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 FAM98CQ17RN3 349 aaKnown RBP10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 MAATS1Q7Z4T9 603 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 PNMA8AQ86V59 439 aaPredicted RBP10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 BAP1Q92560 729 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 FGFBP2Q9BYJ0 223 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 TANGO6Q9C0B7 1094 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 TBC1D7Q9P0N9 293 aa10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 SEC63Q9UGP8 760 aaKnown RBP10.35□□□□□ -0.75
HLA-DOA-201ENST00000229829 USO1O60763 962 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 MCM3P25205 808 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 SLC1A4P43007 532 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 MAGEA1P43355 309 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCNHP51946 323 aaPredicted RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 KCTD19Q17RG1 926 aaPredicted RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 LRRC55Q6ZSA7 311 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 MICALCLQ6ZW33 695 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 DDX12PQ92771 950 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 ARL8AQ96BM9 186 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 EIF3HO15372 352 aaKnown RBP eCLIP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 HSF2BPO75031 334 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 RNASE9P60153 205 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 MAN2A1Q16706 1144 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 CCDC181Q5TID7 509 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 UNC13DQ70J99 1090 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 LRRC47Q8N1G4 583 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 TSEN2Q8NCE0 465 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 NEDD1Q8NHV4 660 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 QTRT2Q9H974 415 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 FAM184BQ9ULE4 1060 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 ZSCAN5CA6NGD5 496 aaPredicted RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 HGSO14964 777 aaPredicted RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 GCFC2P16383 781 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 SNCBQ16143 134 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 ENOX2Q16206 610 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 UBE2SQ16763 222 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 C16orf86Q6ZW13 317 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 MMGT1Q8N4V1 131 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 SNX29Q8TEQ0 813 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 CDK5RAP3Q96JB5 506 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 LZTS2Q9BRK4 669 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 TLR10Q9BXR5 811 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 TSGA10Q9BZW7 698 aa10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 RBM12Q9NTZ6 932 aaKnown RBP10.34□□□□□ -0.75
HLA-DOA-201ENST00000229829 MEFVO15553 781 aaPredicted RBP10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 UPP2O95045 317 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 SLURP2P0DP57 97 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 GUCY2FP51841 1108 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 CACNB1Q02641 598 aaPredicted RBP10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 HGSNATQ68CP4 663 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 ARHGEF1Q92888 912 aaKnown RBP10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 YIPF3Q9GZM5 350 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 HAUS2Q9NVX0 235 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 DDX60LQ5H9U9 1706 aaKnown RBP10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 BUB1BO60566 1050 aaPredicted RBP10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 TLR2O60603 784 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 LCA5LO95447 670 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 KRT14P02533 472 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 ASTE1Q2TB18 679 aaPredicted RBP10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 KLHDC7AQ5VTJ3 777 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 HAUS3Q68CZ6 603 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 CACNA2D4Q7Z3S7 1137 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 GUF1Q8N442 669 aaKnown RBP10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 GPCPD1Q9NPB8 672 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 SPATS2LQ9NUQ6 558 aaKnown RBP10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 NAV1Q8NEY1 1877 aa10.33□□□□□ -0.76
HLA-DOA-201ENST00000229829 ESYT3A0FGR9 886 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 RPS6KA4O75676 772 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 TNNI2P48788 182 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 ARID5AQ03989 594 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 MYO1EQ12965 1108 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 TDRD12Q587J7 1177 aaKnown RBP10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 RAD54LQ92698 747 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 GSTO1P78417 241 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 SNX1Q13596 522 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 COBLL1Q53SF7 1204 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 MEX3CQ5U5Q3 659 aaKnown RBP10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 PDXDC1Q6P996 788 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 DNAAF5Q86Y56 855 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 RIOX1Q9H6W3 641 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 SLC40A1Q9NP59 571 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 NPHP3-ACAD11A0A0J9YXS1 232 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 PVALEFA0A1B0GWK0 134 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 EME2A4GXA9 379 aaPredicted RBP10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 NOL4O94818 638 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 RHBDL3P58872 404 aa10.32□□□□□ -0.76
HLA-DOA-201ENST00000229829 TRADDQ15628 312 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms