RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 PPP4R3CPQ6ZMV5 832 aa16.47■□□□□ 0.23
TRMT1-201ENST00000221504 HDXQ7Z353 690 aa16.47■□□□□ 0.23
TRMT1-201ENST00000221504 C7orf43Q8WVR3 580 aa16.47■□□□□ 0.23
TRMT1-201ENST00000221504 PRMT6Q96LA8 375 aaPredicted RBP16.47■□□□□ 0.23
TRMT1-201ENST00000221504 CEP72Q9P209 647 aa16.47■□□□□ 0.23
TRMT1-201ENST00000221504 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
TRMT1-201ENST00000221504 L1RE1Q9UN81 338 aa16.47■□□□□ 0.23
TRMT1-201ENST00000221504 A0A1W2PRG0 241 aa16.46■□□□□ 0.23
TRMT1-201ENST00000221504 POLR3GO15318 223 aaPredicted RBP16.46■□□□□ 0.23
TRMT1-201ENST00000221504 SPATA31C1P0DKV0 1188 aa16.46■□□□□ 0.23
TRMT1-201ENST00000221504 TAL1P17542 331 aaPredicted RBP16.46■□□□□ 0.23
TRMT1-201ENST00000221504 EDRF1Q3B7T1 1238 aa16.46■□□□□ 0.23
TRMT1-201ENST00000221504 CAPZA3Q96KX2 299 aa16.46■□□□□ 0.23
TRMT1-201ENST00000221504 ZHX3Q9H4I2 956 aa16.46■□□□□ 0.23
TRMT1-201ENST00000221504 DNM3Q9UQ16 869 aa16.46■□□□□ 0.23
TRMT1-201ENST00000221504 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRMT1-201ENST00000221504 STK24Q9Y6E0 443 aa16.46■□□□□ 0.23
TRMT1-201ENST00000221504 ATAD5Q96QE3 1844 aa16.46■□□□□ 0.22
TRMT1-201ENST00000221504 SSU72P8A0A1W2PR75 194 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 MEIS1O00470 390 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 TACC1O75410 805 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 NOL4O94818 638 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 USP14P54578 494 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 PSMC6P62333 389 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 PABPC4Q13310 644 aaKnown RBP eCLIP16.45■□□□□ 0.222e-6■■■■□ 20.5
TRMT1-201ENST00000221504 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 GIT2Q14161 759 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 ASTE1Q2TB18 679 aaPredicted RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 SYT2Q8N9I0 419 aaPredicted RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 NUCKS1Q9H1E3 243 aaKnown RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 PRR12Q9ULL5 1215 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 JRKLQ9Y4A0 524 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 CAPN6Q9Y6Q1 641 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 MSH4O15457 936 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 HOXA13P31271 388 aaPredicted RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 HGSNATQ68CP4 663 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 GPIHBP1Q8IV16 184 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 MSL3Q8N5Y2 521 aaKnown RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 SYN2Q92777 582 aaPredicted RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 LSM14BQ9BX40 385 aaKnown RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 MLXIPQ9HAP2 919 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 NLRC4Q9NPP4 1024 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 JADE2Q9NQC1 790 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 VAV3Q9UKW4 847 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 FAM184BQ9ULE4 1060 aa16.45■□□□□ 0.22
TRMT1-201ENST00000221504 GOLGB1Q14789 3259 aaKnown RBP16.45■□□□□ 0.22
TRMT1-201ENST00000221504 YDJCA8MPS7 323 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 PIK3CDO00329 1044 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 CASP5P51878 434 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 ADAM9Q13443 819 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 FAM83BQ5T0W9 1011 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 SPICE1Q8N0Z3 855 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 REEP2Q9BRK0 252 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 HERC5Q9UII4 1024 aaKnown RBP16.44■□□□□ 0.22
TRMT1-201ENST00000221504 CETN3O15182 167 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 ZNF185O15231 689 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 PJA2O43164 708 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 CYP3A4P08684 503 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 MAGEA1P43355 309 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 CAGE1Q8TC20 777 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 SUGCTQ9HAC7 445 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 SNX12Q9UMY4 172 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 SMCHD1A6NHR9 2005 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 MYH10P35580 1976 aa16.44■□□□□ 0.22
TRMT1-201ENST00000221504 PPIP5K2O43314 1243 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 MOCS3O95396 460 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 NR2F2P24468 414 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 STAT2P52630 851 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 GFPT1Q06210 699 aaPredicted RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 SLC9C1Q4G0N8 1177 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 TDRD12Q587J7 1177 aaKnown RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 SFMBT2Q5VUG0 894 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 SFR1Q86XK3 245 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 SUPT20HQ8NEM7 779 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 CYP2W1Q8TAV3 490 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 ALS2CR12Q96Q35 445 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 PSME4Q14997 1843 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 H3BQF6 201 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 RBAK-RBAKDNI3L0D1 243 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 PDE2AO00408 941 aaPredicted RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 TLR2O60603 784 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 SERPING1P05155 500 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 ZNF76P36508 570 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 ECE1P42892 770 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 POLR2FP61218 127 aaKnown RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 KNOP1Q1ED39 458 aaKnown RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 EPM2AIP1Q7L775 607 aaPredicted RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 TXLNBQ8N3L3 684 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 CRACR2AQ9BSW2 395 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 POLR3CQ9BUI4 534 aaPredicted RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 ZCCHC17Q9NP64 241 aaKnown RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 RNF216Q9NWF9 866 aaPredicted RBP16.43■□□□□ 0.22
TRMT1-201ENST00000221504 TMOD2Q9NZR1 351 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 TRAF3IP3Q9Y228 551 aa16.43■□□□□ 0.22
TRMT1-201ENST00000221504 TARSL2A2RTX5 802 aaKnown RBP16.42■□□□□ 0.22
TRMT1-201ENST00000221504 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
TRMT1-201ENST00000221504 MCM3P25205 808 aa16.42■□□□□ 0.22
TRMT1-201ENST00000221504 CYP4A11Q02928 519 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms