RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 RpainQ9CWY9 219 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Zcchc8Q9CYA6 709 aaKnown RBP12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Rsrc1Q9DBU6 334 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Trove2O08848 538 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tmtc1Q3UV71 942 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Krt40Q6IFX3 439 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 KhnynQ80U38 671 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 LRWD1Q8BUI3 648 aaKnown RBP12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 RadxQ8C779 850 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Kctd10Q922M3 315 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ahnak2E9PYB0 1738 aaKnown RBP12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm45208A0A140LJ36 292 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Serpina1bP22599 413 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 ProcP33587 460 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Sparcl1P70663 650 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Fmnl3Q6ZPF4 1028 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Hook3Q8BUK6 718 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Usp38Q8BW70 1042 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 PreplQ8C167 725 aa12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ints9Q8K114 658 aaKnown RBP12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 AdnpQ9Z103 1108 aaKnown RBP12.33□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Fbxw10Q5SUS0 1030 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Sh3gl2Q62420 352 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Bsdc1Q80Y55 427 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 CalcbQ99MP3 130 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Btbd18A0A0A6YY25 723 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Apol10bG3X9K7 334 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Exoc4O35382 975 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Acot6Q32Q92 419 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 AsphQ8BSY0 741 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ildr1Q8CBR1 537 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 A0A286YCQ6 122 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 A430078G23RikE9Q7Y4 484 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Krt18P05784 423 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Plekhf1Q3TB82 279 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Fhdc1Q3ULZ2 1149 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Lrrc55Q3UY51 311 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Zbtb17Q60821 794 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Kif5bQ61768 963 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Haus6Q6NV99 933 aaKnown RBP12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Nucks1Q80XU3 234 aaKnown RBP12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Arhgef19Q8BWA8 802 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Morc2bQ8C5W4 1022 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Uts2Q9QZQ3 123 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Slc12a7Q9WVL3 1083 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ubr1O70481 1757 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Mtus1Q5HZI1 1210 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Asap3Q5U464 904 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Mindy1Q76LS9 468 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Pank4Q80YV4 820 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gle1Q8R322 699 aa12.32□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Snapc4Q8BP86 1333 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm38392E9Q2A2 434 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 D1Pas1P16381 660 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Rpl13P47963 211 aaKnown RBP12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tex11Q14AT2 947 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Acsbg2Q2XU92 667 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Olfr832Q7TRG9 312 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Rhobtb3Q9CTN4 611 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Cog1Q9Z160 980 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Trip6Q9Z1Y4 480 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 AdgbG3UZ78 1657 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ccdc6D3YZP9 469 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ephb4P54761 987 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Trim37Q6PCX9 961 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Lrrc15Q80X72 579 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Serpinb13Q8CDC0 389 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Bbs7Q8K2G4 715 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tekt2Q922G7 430 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Mad2l2Q9D752 211 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Abt1Q9QYL7 269 aaKnown RBP12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Cul1Q9WTX6 776 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Znf394Q9Z1D9 521 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tnrc6bQ8BKI2 1810 aaKnown RBP12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Stat3P42227 770 aaKnown RBP12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Kctd1Q5M956 257 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Zbtb39Q6PDK0 712 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ero1aQ8R180 464 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Krt34Q9D646 392 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gja10Q9WUS4 505 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Slit2Q9R1B9 1521 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Tns3Q5SSZ5 1440 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Myh7bA2AQP0 1941 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm45261A0A1B0GSP6 197 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Gm1758F6VZZ1 202 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 NemfQ8CCP0 1064 aaKnown RBP12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Arhgap18Q8K0Q5 663 aa12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Mmtag2Q99LX5 260 aaKnown RBP12.31□□□□□ -0.44
Topbp1-201ENSMUST00000035164 LdhaP06151 332 aaKnown RBP12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Lrrn4P59383 733 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Cracr2aQ3UP38 310 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 SlmapQ3URD3 845 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Ankrd13aQ80UP5 588 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Rsad2Q8CBB9 362 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Vmn2r71L7N2D8 855 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 RelaQ04207 549 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Trmt1Q3TX08 663 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Fam196bQ6GQV1 535 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Xlr3bQ6P205 226 aa12.3□□□□□ -0.44
Topbp1-201ENSMUST00000035164 Mxd3Q80US8 206 aa12.3□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms