RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Vta1Q9CR26 309 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Adgrf5G5E8Q8 1348 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Pnpla6Q3TRM4 1355 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Itgb4A2A863 1818 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cdc27A2A6Q5 825 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tp53P02340 387 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Vav1P27870 845 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Rab17P35292 214 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 PctpP53808 214 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Il1rapl1P59823 695 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Crnkl1P63154 690 aaKnown RBP12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Polr2cP97760 275 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Palb2Q3U0P1 1104 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ccser2Q3UHI0 833 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Rnf10Q3UIW5 804 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ift88Q61371 824 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Kcnk18Q6VV64 394 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ckap2lQ7TS74 745 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Dclk3Q8BWQ5 790 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tmem60Q8K174 133 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ttc39cQ8VE09 580 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Kiaa2013Q91X21 634 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Arhgef3Q91X46 524 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mapk8Q91Y86 384 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tomm20lQ9D4V6 152 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Speer4bQ9D9F7 267 aa12.5□□□□□ -0.41
Trim55-201ENSMUST00000029139 Kif1bQ60575 1816 aaKnown RBP12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Btbd35f16A0A087WSN2 498 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Dhtkd1A2ATU0 921 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mms22lB1AUR6 1238 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 RelaQ04207 549 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Kcnma1Q08460 1209 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Hdhd2Q3UGR5 259 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Magee2Q52KG3 523 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 SpdyaQ5IBH7 310 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Pde3bQ61409 1100 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Sec62Q8BU14 398 aaKnown RBP12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Spata2Q8K004 515 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Exoc1Q8R3S6 894 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Fbxo21Q8VDH1 627 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Lrrc49Q91YK0 686 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 AticQ9CWJ9 592 aaKnown RBP12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Olr1Q9EQ09 363 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ndel1Q9ERR1 345 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Kif1aP33173 1695 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Gm28919A0A087WP35 240 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Magea4F2Z493 315 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Gm10354K7N6A0 256 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Rhox6O70238 227 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Nol4P60954 483 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 MagohP61327 146 aaKnown RBP12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Agap2Q3UHD9 1186 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mtus1Q5HZI1 1210 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Pcdhga11Q91XY8 933 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mrpl11Q9CQF0 192 aaKnown RBP12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 MagohbQ9CQL1 146 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Nde1Q9CZA6 344 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cse1lQ9ERK4 971 aaKnown RBP12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Clic4Q9QYB1 253 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Vnn1Q9Z0K8 512 aa12.49□□□□□ -0.41
Trim55-201ENSMUST00000029139 Akap17bA2A3V1 959 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Gm20521D3Z5F7 333 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Akr1b7P21300 316 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Myd88P22366 296 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ctnna1P26231 906 aaKnown RBP12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cdk7Q03147 346 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Naf1Q3UMQ8 489 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Olfr814Q7TRH4 310 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ripor2Q80U16 1078 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Serpina3fQ80X76 445 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 NelfbQ8C4Y3 580 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Brf1Q8CFK2 676 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Pde5aQ8CG03 865 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Pglyrp2Q8VCS0 530 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cyp4f15Q99N18 534 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Sf3a3Q9D554 501 aaKnown RBP12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Baiap2l1Q9DBJ3 514 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Gpatch1Q9DBM1 930 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 PhaxQ9JJT9 385 aaKnown RBP12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Nphs1Q9QZS7 1256 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mst1rQ62190 1378 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Myh4Q5SX39 1939 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Myh1Q5SX40 1942 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mybpc1D3YU50 1127 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Zfp780bE9Q2S6 806 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Serpinb9eO08806 377 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Rph3aP47708 681 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ikzf1Q03267 517 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Itm2aQ61500 263 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Clec16aQ80U30 1036 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ttc22Q8C159 568 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Trim68Q8K243 485 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cog2Q921L5 731 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Dctn2Q99KJ8 402 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Bpifa3Q9D9J8 232 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Rapgef4Q9EQZ6 1011 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Trp53inp1Q9QXE4 239 aa12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Noc2lQ9WV70 747 aaKnown RBP12.48□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ulk4Q3V129 1303 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Enpp1P06802 906 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms