RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 RPN14P53196 417 aa2.42□□□□□ -2.02
snR43snR43 PRP38Q00723 242 aaPredicted RBP2.42□□□□□ -2.02
snR43snR43 NRG1Q03125 231 aa2.42□□□□□ -2.02
snR43snR43 YMR210WQ03649 449 aa2.42□□□□□ -2.02
snR43snR43 GIS1Q03833 894 aa2.42□□□□□ -2.02
snR43snR43 TDA9Q04545 1251 aa2.42□□□□□ -2.02
snR43snR43 RGC1Q06108 1083 aaKnown RBP2.42□□□□□ -2.02
snR43snR43 ATG33Q06485 197 aa2.42□□□□□ -2.02
snR43snR43 CUE5Q08412 411 aaKnown RBP2.42□□□□□ -2.02
snR43snR43 MRH1Q12117 320 aaPredicted RBP2.42□□□□□ -2.02
snR43snR43 PRS5Q12265 496 aaKnown RBP2.42□□□□□ -2.02
snR43snR43 ICT1Q12385 394 aa2.42□□□□□ -2.02
snR43snR43 STE3P06783 470 aa2.41□□□□□ -2.02
snR43snR43 CDC21P06785 304 aa2.41□□□□□ -2.02
snR43snR43 YML002WP0CF17 737 aa2.41□□□□□ -2.02
snR43snR43 RSR1P13856 272 aa2.41□□□□□ -2.02
snR43snR43 GLK1P17709 500 aaKnown RBP2.41□□□□□ -2.02
snR43snR43 ERG4P25340 473 aa2.41□□□□□ -2.02
snR43snR43 ERG1P32476 496 aaKnown RBP2.41□□□□□ -2.02
snR43snR43 RMA1P36001 430 aaKnown RBP2.41□□□□□ -2.02
snR43snR43 SPC42P36094 363 aa2.41□□□□□ -2.02
snR43snR43 RKM3P38222 552 aa2.41□□□□□ -2.02
snR43snR43 MSG5P38590 489 aa2.41□□□□□ -2.02
snR43snR43 MET30P39014 640 aa2.41□□□□□ -2.02
snR43snR43 PRP39P39682 629 aaKnown RBP2.41□□□□□ -2.02
snR43snR43 NPT1P39683 429 aaKnown RBP2.41□□□□□ -2.02
snR43snR43 FRT2P39734 528 aa2.41□□□□□ -2.02
snR43snR43 YNL195CP40168 261 aa2.41□□□□□ -2.02
snR43snR43 ICE2P40499 491 aa2.41□□□□□ -2.02
snR43snR43 STB2P46679 850 aa2.41□□□□□ -2.02
snR43snR43 PMT4P46971 762 aa2.41□□□□□ -2.02
snR43snR43 BPL1P48445 690 aaPredicted RBP2.41□□□□□ -2.02
snR43snR43 MSE1P48525 536 aa2.41□□□□□ -2.02
snR43snR43 TEL2P53038 688 aa2.41□□□□□ -2.02
snR43snR43 MDM34P53083 459 aa2.41□□□□□ -2.02
snR43snR43 SLI1P53304 468 aa2.41□□□□□ -2.02
snR43snR43 ALF1P53904 254 aa2.41□□□□□ -2.02
snR43snR43 YDR541CQ03049 344 aa2.41□□□□□ -2.02
snR43snR43 BCH1Q05029 724 aa2.41□□□□□ -2.02
snR43snR43 CDC123Q05791 360 aa2.41□□□□□ -2.02
snR43snR43 VPS38Q05919 439 aa2.41□□□□□ -2.02
snR43snR43 NOP6Q07623 225 aaKnown RBP2.41□□□□□ -2.02
snR43snR43 YOL159CQ08300 171 aa2.41□□□□□ -2.02
snR43snR43 MMT2Q08970 484 aa2.41□□□□□ -2.02
snR43snR43 YDR056CQ12025 205 aa2.41□□□□□ -2.02
snR43snR43 APL4Q12028 832 aa2.41□□□□□ -2.02
snR43snR43 PUS9Q12069 462 aa2.41□□□□□ -2.02
snR43snR43 REX3Q12090 404 aa2.41□□□□□ -2.02
snR43snR43 YRA1Q12159 226 aaKnown RBP2.41□□□□□ -2.02
snR43snR43 HER1Q12276 1246 aa2.41□□□□□ -2.02
snR43snR43 RRP42Q12277 265 aaPredicted RBP2.41□□□□□ -2.02
snR43snR43 YOR032W-AQ8TGS1 66 aa2.41□□□□□ -2.02
snR43snR43 BRR1Q99177 341 aaPredicted RBP2.41□□□□□ -2.02
snR43snR43 RPS21AP0C0V8 87 aaKnown RBP2.4□□□□□ -2.03
snR43snR43 CKI1P20485 582 aa2.4□□□□□ -2.03
snR43snR43 MGR1P25573 417 aa2.4□□□□□ -2.03
snR43snR43 STP22P25604 385 aa2.4□□□□□ -2.03
snR43snR43 TAH1P25638 111 aaPredicted RBP2.4□□□□□ -2.03
snR43snR43 CMK1P27466 446 aaKnown RBP2.4□□□□□ -2.03
snR43snR43 URA10P30402 227 aa2.4□□□□□ -2.03
snR43snR43 SSH4P32343 579 aa2.4□□□□□ -2.03
snR43snR43 HIS7P33734 552 aaKnown RBP2.4□□□□□ -2.03
snR43snR43 YKL100CP34248 587 aa2.4□□□□□ -2.03
snR43snR43 OAR1P35731 278 aa2.4□□□□□ -2.03
snR43snR43 MUD2P36084 527 aaKnown RBP2.4□□□□□ -2.03
snR43snR43 OM14P38325 134 aa2.4□□□□□ -2.03
snR43snR43 VHC1P38329 1120 aa2.4□□□□□ -2.03
snR43snR43 POP4P38336 279 aa2.4□□□□□ -2.03
snR43snR43 MUP3P38734 546 aa2.4□□□□□ -2.03
snR43snR43 VPS52P39904 641 aa2.4□□□□□ -2.03
snR43snR43 EMP65P40085 556 aa2.4□□□□□ -2.03
snR43snR43 APQ12P40532 138 aa2.4□□□□□ -2.03
snR43snR43 DJP1P40564 432 aa2.4□□□□□ -2.03
snR43snR43 SAE2P46946 345 aa2.4□□□□□ -2.03
snR43snR43 GCD14P46959 383 aaPredicted RBP2.4□□□□□ -2.03
snR43snR43 BNA2P47125 453 aa2.4□□□□□ -2.03
snR43snR43 TIS11P47977 285 aa2.4□□□□□ -2.03
snR43snR43 PRP31P49704 494 aaPredicted RBP2.4□□□□□ -2.03
snR43snR43 BIO3P50277 480 aa2.4□□□□□ -2.03
snR43snR43 BOL2P53082 120 aa2.4□□□□□ -2.03
snR43snR43 MTL1P53214 551 aa2.4□□□□□ -2.03
snR43snR43 ATG4P53867 494 aa2.4□□□□□ -2.03
snR43snR43 RPL22BP56628 122 aaKnown RBP2.4□□□□□ -2.03
snR43snR43 YSA1Q01976 231 aa2.4□□□□□ -2.03
snR43snR43 ENB1Q08299 606 aa2.4□□□□□ -2.03
snR43snR43 YOR376WQ08900 122 aa2.4□□□□□ -2.03
snR43snR43 AIM41Q12032 185 aa2.4□□□□□ -2.03
snR43snR43 MDM32Q12171 622 aa2.4□□□□□ -2.03
snR43snR43 COX17Q12287 69 aa2.4□□□□□ -2.03
snR43snR43 PAR32Q12515 295 aaKnown RBP2.4□□□□□ -2.03
snR43snR43 YGR161W-CQ3E744 92 aa2.4□□□□□ -2.03
snR43snR43 FAS1P07149 2051 aaKnown RBP2.39□□□□□ -2.03
snR43snR43 RAD1P06777 1100 aa2.39□□□□□ -2.03
snR43snR43 SEC53P07283 254 aaKnown RBP2.39□□□□□ -2.03
snR43snR43 TRP4P07285 380 aaPredicted RBP2.39□□□□□ -2.03
snR43snR43 ALG7P07286 448 aa2.39□□□□□ -2.03
snR43snR43 GUK1P15454 187 aaKnown RBP2.39□□□□□ -2.03
snR43snR43 TRX2P22803 104 aaKnown RBP2.39□□□□□ -2.03
snR43snR43 MGT1P26188 188 aa2.39□□□□□ -2.03
snR43snR43 URA7P28274 579 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms