RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	EMP70	P32802	667 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	RPC25	P35718	212 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	YPT52	P36018	234 aa	Known RBP	5.78	□□□□□ -1.48
TFB4	YPR056W	AIM29	P36154	155 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	IML3	P38265	245 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	CBR1	P38626	284 aa	Known RBP	5.78	□□□□□ -1.48
TFB4	YPR056W	ALP1	P38971	573 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	SWP82	P43554	623 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	FAR3	P46671	204 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	HIT1	P46973	164 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	YJL118W	P47022	219 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	DPB11	P47027	764 aa	Predicted RBP	5.78	□□□□□ -1.48
TFB4	YPR056W	ZPR1	P53303	486 aa	Known RBP	5.78	□□□□□ -1.48
TFB4	YPR056W	CUS2	P53830	285 aa	Predicted RBP	5.78	□□□□□ -1.48
TFB4	YPR056W	TAF12	Q03761	539 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	YMR160W	Q03823	816 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	MYO5	Q04439	1219 aa	Known RBP	5.78	□□□□□ -1.48
TFB4	YPR056W	IVY1	Q04934	453 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	YLR283W	Q05867	314 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	NNT1	Q05874	261 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	ARR3	Q06598	404 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	IPK1	Q06667	281 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	GRS2	Q06817	618 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	ABP140	Q08641	628 aa	Known RBP	5.78	□□□□□ -1.48
TFB4	YPR056W	SRO7	Q12038	1033 aa		5.78	□□□□□ -1.48
TFB4	YPR056W	MATALPHA1	P0CY06	175 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	HMLALPHA1	P0CY07	175 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	POL30	P15873	258 aa	Known RBP	5.77	□□□□□ -1.49
TFB4	YPR056W	THR4	P16120	514 aa	Known RBP	5.77	□□□□□ -1.49
TFB4	YPR056W	ALG1	P16661	449 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	UTR1	P21373	530 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	HXT2	P23585	541 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	PBN1	P25580	416 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	IMG1	P25626	169 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	PRR1	P28708	518 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	PSO2	P30620	661 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	FRE1	P32791	686 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	DIA4	P38705	446 aa	Predicted RBP	5.77	□□□□□ -1.49
TFB4	YPR056W	SAP1	P39955	897 aa	Known RBP	5.77	□□□□□ -1.49
TFB4	YPR056W	PCL6	P40038	420 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	MTL1	P53214	551 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	YMR310C	Q04867	317 aa	Predicted RBP	5.77	□□□□□ -1.49
TFB4	YPR056W	VPS74	Q06385	345 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
TFB4	YPR056W	RRP12	Q12754	1228 aa	Known RBP	5.77	□□□□□ -1.49
TFB4	YPR056W	YBR255C-A	Q3E776	120 aa		5.77	□□□□□ -1.49
TFB4	YPR056W	TEF1	P02994	458 aa	Known RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	GAL4	P04386	881 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	RAD3	P06839	778 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	RPL31B	P0C2H9	113 aa	Known RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	YMR085W	P0CF18	432 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	TCP1	P12612	559 aa	Known RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	KRS1	P15180	591 aa	Known RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	ZRC1	P20107	442 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	DPB2	P24482	689 aa	Predicted RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	PPA2	P28239	310 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	IMD2	P38697	523 aa	Known RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	NDC80	P40460	691 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	DSN1	P40568	576 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	CDC40	P40968	455 aa	Predicted RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	YNL181W	P53878	407 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	PIG1	Q06216	648 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	DIA2	Q08496	732 aa	Predicted RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	YOR389W	Q08912	624 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	LSP1	Q12230	341 aa	Known RBP	5.76	□□□□□ -1.49
TFB4	YPR056W	SPO24	Q3E752	67 aa		5.76	□□□□□ -1.49
TFB4	YPR056W	MAS1	P10507	462 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	YSR3	P23501	404 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	PUP3	P25451	205 aa	Known RBP	5.75	□□□□□ -1.49
TFB4	YPR056W	SKG6	P32900	734 aa	Predicted RBP	5.75	□□□□□ -1.49
TFB4	YPR056W	VPS51	P36116	164 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	NTR2	P36118	322 aa	Predicted RBP	5.75	□□□□□ -1.49
TFB4	YPR056W	YMR262W	P38430	313 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	FMO1	P38866	432 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	GET2	P40056	285 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	ARG2	P40360	574 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	FMP33	P46998	180 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	YGR127W	P53275	312 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.75	□□□□□ -1.49	not detected
TFB4	YPR056W	ECM11	Q04110	302 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	YMR226C	Q05016	267 aa	Known RBP	5.75	□□□□□ -1.49
TFB4	YPR056W	GEP3	Q08622	556 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	RAX1	Q08760	435 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	TIP41	Q12199	356 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	YOR029W	Q12243	111 aa		5.75	□□□□□ -1.49
TFB4	YPR056W	PAA1	Q12447	191 aa	Known RBP	5.75	□□□□□ -1.49
TFB4	YPR056W	HRP1	Q99383	534 aa	Known RBP	5.75	□□□□□ -1.49
TFB4	YPR056W	RAD7	P06779	565 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	MATALPHA2	P0CY08	210 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	HMLALPHA2	P0CY09	210 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	CIN8	P27895	1000 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	ATP7	P30902	174 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	UBC6	P33296	250 aa	Predicted RBP	5.74	□□□□□ -1.49
TFB4	YPR056W	SPP381	P38282	291 aa	Predicted RBP	5.74	□□□□□ -1.49
TFB4	YPR056W	PCA1	P38360	1216 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	GPI16	P38875	610 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	YHR210C	P38893	341 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	PRP39	P39682	629 aa	Known RBP	5.74	□□□□□ -1.49
TFB4	YPR056W	YER130C	P39959	443 aa		5.74	□□□□□ -1.49
TFB4	YPR056W	SAD1	P43589	448 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms