RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeast

Gene SPC29, Length 762 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC29	YPL124W	CST26	P38226	397 aa		2.27	□□□□□ -2.05
SPC29	YPL124W	SAS2	P40963	338 aa		2.27	□□□□□ -2.05
SPC29	YPL124W	YDL121C	Q07541	149 aa		2.27	□□□□□ -2.05
SPC29	YPL124W	PSK1	P31374	1356 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	YLR278C	Q05854	1341 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	GCN4	P03069	281 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	AAC3	P18238	307 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	RAD57	P25301	460 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	GFD2	P25370	566 aa	Known RBP	2.26	□□□□□ -2.05
SPC29	YPL124W	SMY1	P32364	656 aa	Known RBP	2.26	□□□□□ -2.05
SPC29	YPL124W	YER186C	P40101	306 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	AZR1	P50080	613 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	YGR018C	P53211	109 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	YIF1	P53845	314 aa	Known RBP	2.26	□□□□□ -2.05
SPC29	YPL124W	RHO5	P53879	331 aa	Known RBP	2.26	□□□□□ -2.05
SPC29	YPL124W	SVL3	Q03088	825 aa	Known RBP	2.26	□□□□□ -2.05
SPC29	YPL124W	AIM32	Q04689	311 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	DNL4	Q08387	944 aa	Predicted RBP	2.26	□□□□□ -2.05
SPC29	YPL124W	JID1	Q12350	301 aa		2.26	□□□□□ -2.05
SPC29	YPL124W	CBP6	P07253	162 aa	Predicted RBP	2.25	□□□□□ -2.05
SPC29	YPL124W	RIP1	P08067	215 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	OCA4	P25366	362 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	IDH2	P28241	369 aa	Known RBP	2.25	□□□□□ -2.05
SPC29	YPL124W	RTC2	P38279	296 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	RFC3	P38629	340 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	TIM17	P39515	158 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	DOT5	P40553	215 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	RMD8	P43620	662 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	ADA2	Q02336	434 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	MRPS16	Q02608	121 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	IMH1	Q06704	911 aa	Known RBP	2.25	□□□□□ -2.05
SPC29	YPL124W	YPR091C	Q06833	770 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	NDE2	Q07500	545 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	SKI7	Q08491	747 aa	Predicted RBP	2.25	□□□□□ -2.05
SPC29	YPL124W	YPS3	Q12303	508 aa		2.25	□□□□□ -2.05
SPC29	YPL124W	ADH1	P00330	348 aa	Known RBP	2.24	□□□□□ -2.05
SPC29	YPL124W	ILV5	P06168	395 aa	Known RBP	2.24	□□□□□ -2.05
SPC29	YPL124W	RPI1	P23250	407 aa	Known RBP	2.24	□□□□□ -2.05
SPC29	YPL124W	CTR86	P25355	563 aa		2.24	□□□□□ -2.05
SPC29	YPL124W	RML2	P32611	393 aa		2.24	□□□□□ -2.05
SPC29	YPL124W	CMC1	P36064	111 aa		2.24	□□□□□ -2.05
SPC29	YPL124W	VTC2	P43585	828 aa		2.24	□□□□□ -2.05
SPC29	YPL124W	PGU1	P47180	361 aa		2.24	□□□□□ -2.05
SPC29	YPL124W	MTQ1	P53944	314 aa		2.24	□□□□□ -2.05
SPC29	YPL124W	RFM1	Q12192	310 aa		2.24	□□□□□ -2.05
SPC29	YPL124W	PRM7	Q12459	698 aa		2.24	□□□□□ -2.05
SPC29	YPL124W	GPH1	P06738	902 aa	Known RBP	2.23	□□□□□ -2.05
SPC29	YPL124W	SPS4	P09937	338 aa		2.23	□□□□□ -2.05
SPC29	YPL124W	RPB5	P20434	215 aa		2.23	□□□□□ -2.05
SPC29	YPL124W	AAT2	P23542	418 aa	Known RBP	2.23	□□□□□ -2.05
SPC29	YPL124W	PMT1	P33775	817 aa		2.23	□□□□□ -2.05
SPC29	YPL124W	UTP9	P38882	575 aa	Known RBP	2.23	□□□□□ -2.05
SPC29	YPL124W	BAT1	P38891	393 aa	Known RBP	2.23	□□□□□ -2.05
SPC29	YPL124W	ALD5	P40047	520 aa	Known RBP	2.23	□□□□□ -2.05
SPC29	YPL124W	YJR011C	P47086	261 aa	Predicted RBP	2.23	□□□□□ -2.05
SPC29	YPL124W	BET5	Q03630	159 aa		2.23	□□□□□ -2.05
SPC29	YPL124W	GIR2	Q03768	265 aa	Predicted RBP	2.23	□□□□□ -2.05
SPC29	YPL124W	BCH1	Q05029	724 aa		2.23	□□□□□ -2.05
SPC29	YPL124W	COX4	P04037	155 aa		2.22	□□□□□ -2.05
SPC29	YPL124W	OM14	P38325	134 aa		2.22	□□□□□ -2.05
SPC29	YPL124W	YHR054C	P38780	354 aa		2.22	□□□□□ -2.05
SPC29	YPL124W	HXT14	P42833	540 aa		2.22	□□□□□ -2.05
SPC29	YPL124W	HMS2	P47175	358 aa		2.22	□□□□□ -2.05
SPC29	YPL124W	MKC7	P53379	596 aa		2.22	□□□□□ -2.05
SPC29	YPL124W	ATG29	Q12092	213 aa		2.22	□□□□□ -2.05
SPC29	YPL124W	RRI2	Q12348	645 aa		2.22	□□□□□ -2.05
SPC29	YPL124W	NAM2	P11325	894 aa		2.21	□□□□□ -2.06
SPC29	YPL124W	MSI1	P13712	422 aa		2.21	□□□□□ -2.06
SPC29	YPL124W	PRR1	P28708	518 aa		2.21	□□□□□ -2.06
SPC29	YPL124W	CYS4	P32582	507 aa	Known RBP	2.21	□□□□□ -2.06
SPC29	YPL124W	SBE22	P38814	852 aa		2.21	□□□□□ -2.06
SPC29	YPL124W	PCF11	P39081	626 aa	Predicted RBP	2.21	□□□□□ -2.06
SPC29	YPL124W	ESL1	P40456	1118 aa		2.21	□□□□□ -2.06
SPC29	YPL124W	BNS1	P50084	137 aa		2.21	□□□□□ -2.06
SPC29	YPL124W	FLC3	P53121	802 aa		2.21	□□□□□ -2.06
SPC29	YPL124W	NUP116	Q02630	1113 aa		2.21	□□□□□ -2.06
SPC29	YPL124W	SNU66	Q12420	587 aa	Predicted RBP	2.21	□□□□□ -2.06
SPC29	YPL124W	MRP7	P12687	371 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	MET8	P15807	274 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	SPO12	P17123	173 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	DTR1	P38125	572 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	OXA1	P39952	402 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	ARF3	P40994	183 aa	RIP-Chip data	2.2	□□□□□ -2.06	not detected
SPC29	YPL124W	SFH5	P47008	294 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	CRH1	P53301	507 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	JJJ1	P53863	590 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	RPT6	Q01939	405 aa	Known RBP	2.2	□□□□□ -2.06
SPC29	YPL124W	RQC1	Q05468	723 aa	Known RBP	2.2	□□□□□ -2.06
SPC29	YPL124W	LIP2	Q06005	328 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	COG4	Q06096	861 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	RIF2	Q06208	395 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	PIN3	Q06449	215 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	CMS1	Q07897	291 aa	Known RBP	2.2	□□□□□ -2.06
SPC29	YPL124W	SMF3	Q12078	473 aa	Predicted RBP	2.2	□□□□□ -2.06
SPC29	YPL124W	MED1	Q12321	566 aa		2.2	□□□□□ -2.06
SPC29	YPL124W	SIN4	P32259	974 aa		2.19	□□□□□ -2.06
SPC29	YPL124W	RPN12	P32496	274 aa		2.19	□□□□□ -2.06
SPC29	YPL124W	IES6	P32617	166 aa		2.19	□□□□□ -2.06
SPC29	YPL124W	VHC1	P38329	1120 aa		2.19	□□□□□ -2.06
SPC29	YPL124W	MET18	P40469	1032 aa		2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms