RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	TES1	P41903	349 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	YFL012W	P43580	148 aa		4.8	□□□□□ -1.64
COT1	YOR316C	CHA4	P43634	648 aa		4.8	□□□□□ -1.64
COT1	YOR316C	BNA3	P47039	444 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	ZIP2	P53061	704 aa		4.8	□□□□□ -1.64
COT1	YOR316C	RBG2	P53295	368 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	LSC1	P53598	329 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	YNL058C	P53947	316 aa		4.8	□□□□□ -1.64
COT1	YOR316C	YKU80	Q04437	629 aa		4.8	□□□□□ -1.64
COT1	YOR316C	YLR177W	Q06251	628 aa		4.8	□□□□□ -1.64
COT1	YOR316C	GRS2	Q06817	618 aa		4.8	□□□□□ -1.64
COT1	YOR316C	YET3	Q07451	203 aa		4.8	□□□□□ -1.64
COT1	YOR316C	YOR342C	Q12182	319 aa		4.8	□□□□□ -1.64
COT1	YOR316C	NOP58	Q12499	511 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	YLR149C	Q99296	730 aa		4.8	□□□□□ -1.64
COT1	YOR316C	COX1	P00401	534 aa		4.79	□□□□□ -1.64
COT1	YOR316C	TEF1	P02994	458 aa	Known RBP	4.79	□□□□□ -1.64
COT1	YOR316C	NSP1	P14907	823 aa	Known RBP	4.79	□□□□□ -1.64
COT1	YOR316C	PRP2	P20095	876 aa	Predicted RBP	4.79	□□□□□ -1.64
COT1	YOR316C	AMD2	P22580	549 aa		4.79	□□□□□ -1.64
COT1	YOR316C	YCR102C	P25608	368 aa		4.79	□□□□□ -1.64
COT1	YOR316C	AAD3	P25612	363 aa		4.79	□□□□□ -1.64
COT1	YOR316C	RPD3	P32561	433 aa		4.79	□□□□□ -1.64
COT1	YOR316C	ATO2	P32907	282 aa		4.79	□□□□□ -1.64
COT1	YOR316C	DHR2	P36009	735 aa	Predicted RBP	4.79	□□□□□ -1.64
COT1	YOR316C	FMP46	P36141	133 aa	Known RBP	4.79	□□□□□ -1.64
COT1	YOR316C	GND1	P38720	489 aa	Known RBP	4.79	□□□□□ -1.64
COT1	YOR316C	YHI9	P38765	294 aa		4.79	□□□□□ -1.64
COT1	YOR316C	PCL5	P38794	229 aa		4.79	□□□□□ -1.64
COT1	YOR316C	YHR182W	P38870	785 aa		4.79	□□□□□ -1.64
COT1	YOR316C	URB2	P47108	1174 aa		4.79	□□□□□ -1.64
COT1	YOR316C	UPF3	P48412	387 aa	Known RBP	4.79	□□□□□ -1.64
COT1	YOR316C	ZRG17	P53735	605 aa		4.79	□□□□□ -1.64
COT1	YOR316C	MRPL19	P53875	158 aa		4.79	□□□□□ -1.64
COT1	YOR316C	PRO2	P54885	456 aa	Known RBP	4.79	□□□□□ -1.64
COT1	YOR316C	SPP2	Q02521	185 aa		4.79	□□□□□ -1.64
COT1	YOR316C	ATP25	Q03153	612 aa		4.79	□□□□□ -1.64
COT1	YOR316C	NHP10	Q03435	203 aa		4.79	□□□□□ -1.64
COT1	YOR316C	TAF11	Q04226	346 aa		4.79	□□□□□ -1.64
COT1	YOR316C	OMS1	Q06668	471 aa		4.79	□□□□□ -1.64
COT1	YOR316C	TEN1	Q07921	160 aa		4.79	□□□□□ -1.64
COT1	YOR316C	SLD7	Q08457	257 aa		4.79	□□□□□ -1.64
COT1	YOR316C	RUD3	Q12234	484 aa	Known RBP	4.79	□□□□□ -1.64
COT1	YOR316C	PRS5	Q12265	496 aa	Known RBP	4.79	□□□□□ -1.64
COT1	YOR316C	NPC2	Q12408	173 aa		4.79	□□□□□ -1.64
COT1	YOR316C	KCS1	Q12494	1050 aa		4.79	□□□□□ -1.64
COT1	YOR316C	ILV2	P07342	687 aa	Known RBP	4.78	□□□□□ -1.64
COT1	YOR316C	RPB2	P08518	1224 aa	Known RBP	4.78	□□□□□ -1.64
COT1	YOR316C	ERG20	P08524	352 aa	Known RBP	4.78	□□□□□ -1.64
COT1	YOR316C	RSR1	P13856	272 aa		4.78	□□□□□ -1.64
COT1	YOR316C	RPB4	P20433	221 aa	Predicted RBP	4.78	□□□□□ -1.64
COT1	YOR316C	CMK1	P27466	446 aa	Known RBP	4.78	□□□□□ -1.64
COT1	YOR316C	SLC1	P33333	303 aa		4.78	□□□□□ -1.64
COT1	YOR316C	YPT52	P36018	234 aa	Known RBP	4.78	□□□□□ -1.64
COT1	YOR316C	BEM4	P39011	633 aa		4.78	□□□□□ -1.64
COT1	YOR316C	URM1	P40554	99 aa	Predicted RBP	4.78	□□□□□ -1.64
COT1	YOR316C	GCD14	P46959	383 aa	Predicted RBP	4.78	□□□□□ -1.64
COT1	YOR316C	SGF73	P53165	657 aa		4.78	□□□□□ -1.64
COT1	YOR316C	DAM1	P53267	343 aa		4.78	□□□□□ -1.64
COT1	YOR316C	FRE4	P53746	719 aa		4.78	□□□□□ -1.64
COT1	YOR316C	HPT1	Q04178	221 aa	Known RBP	4.78	□□□□□ -1.64
COT1	YOR316C	HLR1	Q04429	423 aa		4.78	□□□□□ -1.64
COT1	YOR316C	ENV7	Q12003	364 aa		4.78	□□□□□ -1.64
COT1	YOR316C	NUS1	Q12063	375 aa		4.78	□□□□□ -1.64
COT1	YOR316C	RGS2	Q99188	309 aa		4.78	□□□□□ -1.64
COT1	YOR316C	STE2	D6VTK4	431 aa		4.77	□□□□□ -1.65
COT1	YOR316C	SSC1	P0CS90	654 aa	Known RBP	4.77	□□□□□ -1.65
COT1	YOR316C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
COT1	YOR316C	AMD1	P15274	810 aa	Known RBP	4.77	□□□□□ -1.65
COT1	YOR316C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
COT1	YOR316C	VPS34	P22543	875 aa		4.77	□□□□□ -1.65
COT1	YOR316C	YCR099C	P25657	155 aa		4.77	□□□□□ -1.65
COT1	YOR316C	BUD14	P27637	709 aa		4.77	□□□□□ -1.65
COT1	YOR316C	TIP20	P33891	701 aa		4.77	□□□□□ -1.65
COT1	YOR316C	RPF2	P36160	344 aa	Known RBP	4.77	□□□□□ -1.65
COT1	YOR316C	SMK1	P41808	388 aa		4.77	□□□□□ -1.65
COT1	YOR316C	IRC6	P43615	237 aa		4.77	□□□□□ -1.65
COT1	YOR316C	BNA2	P47125	453 aa		4.77	□□□□□ -1.65
COT1	YOR316C	BOL2	P53082	120 aa		4.77	□□□□□ -1.65
COT1	YOR316C	RCF2	P53721	224 aa		4.77	□□□□□ -1.65
COT1	YOR316C	MOT3	P54785	490 aa	Known RBP	4.77	□□□□□ -1.65
COT1	YOR316C	TIM10	P87108	93 aa		4.77	□□□□□ -1.65
COT1	YOR316C	OSH6	Q02201	448 aa		4.77	□□□□□ -1.65
COT1	YOR316C	YDR541C	Q03049	344 aa		4.77	□□□□□ -1.65
COT1	YOR316C	TLG1	Q03322	224 aa		4.77	□□□□□ -1.65
COT1	YOR316C	USA1	Q03714	838 aa		4.77	□□□□□ -1.65
COT1	YOR316C	RCO1	Q04779	684 aa		4.77	□□□□□ -1.65
COT1	YOR316C	YDR286C	Q05530	114 aa		4.77	□□□□□ -1.65
COT1	YOR316C	IRC13	Q08630	104 aa		4.77	□□□□□ -1.65
COT1	YOR316C	AKR2	Q12013	749 aa		4.77	□□□□□ -1.65
COT1	YOR316C	YOL107W	Q12239	342 aa		4.77	□□□□□ -1.65
COT1	YOR316C	RMD5	Q12508	421 aa		4.77	□□□□□ -1.65
COT1	YOR316C	ARG4	P04076	463 aa	Predicted RBP	4.76	□□□□□ -1.65
COT1	YOR316C	GAL7	P08431	366 aa		4.76	□□□□□ -1.65
COT1	YOR316C	RPS21A	P0C0V8	87 aa	Known RBP	4.76	□□□□□ -1.65
COT1	YOR316C	MET8	P15807	274 aa		4.76	□□□□□ -1.65
COT1	YOR316C	CLB1	P24868	471 aa		4.76	□□□□□ -1.65
COT1	YOR316C	SED4	P25365	1065 aa		4.76	□□□□□ -1.65
COT1	YOR316C	MRPL9	P31334	269 aa		4.76	□□□□□ -1.65
COT1	YOR316C	LTV1	P34078	463 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms