RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeastyeast

Gene ATG3, Length 933 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG3YNR007C NBP1P52919 319 aaPredicted RBP2.95□□□□□ -1.94
ATG3YNR007C MND1P53102 219 aa2.95□□□□□ -1.94
ATG3YNR007C YGR066CP53242 292 aa2.95□□□□□ -1.94
ATG3YNR007C NNF2P53253 936 aa2.95□□□□□ -1.94
ATG3YNR007C DRN1P53255 507 aaKnown RBP2.95□□□□□ -1.94
ATG3YNR007C YPL014WQ02606 381 aa2.95□□□□□ -1.94
ATG3YNR007C SMA1Q02651 245 aa2.95□□□□□ -1.94
ATG3YNR007C ARP10Q04549 284 aa2.95□□□□□ -1.94
ATG3YNR007C RSF1Q05043 376 aa2.95□□□□□ -1.94
ATG3YNR007C TSR1Q07381 788 aaKnown RBP2.95□□□□□ -1.94
ATG3YNR007C ABP140Q08641 628 aaKnown RBP2.95□□□□□ -1.94
ATG3YNR007C RPN8Q08723 338 aaKnown RBP2.95□□□□□ -1.94
ATG3YNR007C MF(ALPHA)1P01149 165 aa2.94□□□□□ -1.94
ATG3YNR007C RPS3P05750 240 aaKnown RBP2.94□□□□□ -1.94
ATG3YNR007C RPS14AP06367 137 aaKnown RBP2.94□□□□□ -1.94
ATG3YNR007C CHS1P08004 1131 aa2.94□□□□□ -1.94
ATG3YNR007C FPR1P20081 114 aaKnown RBP2.94□□□□□ -1.94
ATG3YNR007C OCA4P25366 362 aa2.94□□□□□ -1.94
ATG3YNR007C TRS65P32893 560 aa2.94□□□□□ -1.94
ATG3YNR007C YKL097CP34245 136 aa2.94□□□□□ -1.94
ATG3YNR007C JNM1P36224 373 aa2.94□□□□□ -1.94
ATG3YNR007C RIM2P38127 377 aa2.94□□□□□ -1.94
ATG3YNR007C MUM2P38236 366 aa2.94□□□□□ -1.94
ATG3YNR007C YBR225WP38321 900 aa2.94□□□□□ -1.94
ATG3YNR007C RPS14BP39516 138 aaKnown RBP2.94□□□□□ -1.94
ATG3YNR007C ELO1P39540 310 aa2.94□□□□□ -1.94
ATG3YNR007C LCB2P40970 561 aa2.94□□□□□ -1.94
ATG3YNR007C IAH1P41734 238 aa2.94□□□□□ -1.94
ATG3YNR007C UFE1P41834 346 aa2.94□□□□□ -1.94
ATG3YNR007C TOS3P43637 560 aa2.94□□□□□ -1.94
ATG3YNR007C AIM23P47015 356 aa2.94□□□□□ -1.94
ATG3YNR007C FLC3P53121 802 aa2.94□□□□□ -1.94
ATG3YNR007C YNL247WP53852 767 aaKnown RBP2.94□□□□□ -1.94
ATG3YNR007C EFM6P53970 246 aa2.94□□□□□ -1.94
ATG3YNR007C TAF9Q05027 157 aa2.94□□□□□ -1.94
ATG3YNR007C YEH1Q07804 573 aa2.94□□□□□ -1.94
ATG3YNR007C FMP40Q08968 688 aaPredicted RBP2.94□□□□□ -1.94
ATG3YNR007C YPL272CQ08984 517 aa2.94□□□□□ -1.94
ATG3YNR007C CDC37P06101 506 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C ARD1P07347 238 aaPredicted RBP2.93□□□□□ -1.94
ATG3YNR007C RPL4AP10664 362 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C POL30P15873 258 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C PPH22P23595 377 aa2.93□□□□□ -1.94
ATG3YNR007C SSE2P32590 693 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C CSG2P35206 410 aa2.93□□□□□ -1.94
ATG3YNR007C MRPL40P36534 297 aa2.93□□□□□ -1.94
ATG3YNR007C ECM13P38195 257 aa2.93□□□□□ -1.94
ATG3YNR007C TSC10P38342 320 aa2.93□□□□□ -1.94
ATG3YNR007C MED6P38782 295 aa2.93□□□□□ -1.94
ATG3YNR007C SMC2P38989 1170 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C AVT2P39981 480 aa2.93□□□□□ -1.94
ATG3YNR007C RGI2P40188 164 aa2.93□□□□□ -1.94
ATG3YNR007C ARF3P40994 183 aaRIP-Chip data2.93□□□□□ -1.94not detected
ATG3YNR007C RMD8P43620 662 aa2.93□□□□□ -1.94
ATG3YNR007C RTT101P47050 842 aa2.93□□□□□ -1.94
ATG3YNR007C RPL4BP49626 362 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C ERG26P53199 349 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C RBG2P53295 368 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C VPS75P53853 264 aa2.93□□□□□ -1.94
ATG3YNR007C NGL3Q03210 505 aa2.93□□□□□ -1.94
ATG3YNR007C CTL1Q03220 320 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C HER2Q03557 464 aa2.93□□□□□ -1.94
ATG3YNR007C SXM1Q04175 944 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C GYL1Q04322 720 aa2.93□□□□□ -1.94
ATG3YNR007C RTN1Q04947 295 aaKnown RBP2.93□□□□□ -1.94
ATG3YNR007C CDD1Q06549 142 aa2.93□□□□□ -1.94
ATG3YNR007C YPR078CQ06813 372 aa2.93□□□□□ -1.94
ATG3YNR007C YLR012CQ07927 99 aa2.93□□□□□ -1.94
ATG3YNR007C YPQ1Q12010 308 aa2.93□□□□□ -1.94
ATG3YNR007C YJR112W-AQ3E743 109 aa2.93□□□□□ -1.94
ATG3YNR007C YBR298C-AQ8TGK4 73 aa2.93□□□□□ -1.94
ATG3YNR007C INH1P01097 85 aa2.92□□□□□ -1.94
ATG3YNR007C ARG81P05085 880 aa2.92□□□□□ -1.94
ATG3YNR007C CDC31P06704 161 aaKnown RBP2.92□□□□□ -1.94
ATG3YNR007C CDC33P07260 213 aaKnown RBP2.92□□□□□ -1.94
ATG3YNR007C DFR1P07807 211 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
ATG3YNR007C CBS1P14066 229 aa2.92□□□□□ -1.94
ATG3YNR007C MET8P15807 274 aa2.92□□□□□ -1.94
ATG3YNR007C BUD5P25300 642 aaPredicted RBP2.92□□□□□ -1.94
ATG3YNR007C RRT12P25381 491 aa2.92□□□□□ -1.94
ATG3YNR007C POL4P25615 582 aa2.92□□□□□ -1.94
ATG3YNR007C EBP2P36049 427 aaKnown RBP2.92□□□□□ -1.94
ATG3YNR007C TIF5P38431 405 aaKnown RBP2.92□□□□□ -1.94
ATG3YNR007C DBP8P38719 431 aa2.92□□□□□ -1.94
ATG3YNR007C CCT6P39079 546 aa2.92□□□□□ -1.94
ATG3YNR007C FHL1P39521 936 aa2.92□□□□□ -1.94
ATG3YNR007C NDE1P40215 560 aa2.92□□□□□ -1.94
ATG3YNR007C IRC6P43615 237 aa2.92□□□□□ -1.94
ATG3YNR007C CPR7P47103 393 aa2.92□□□□□ -1.94
ATG3YNR007C APT1P49435 187 aaKnown RBP2.92□□□□□ -1.94
ATG3YNR007C PYK2P52489 506 aaKnown RBP2.92□□□□□ -1.94
ATG3YNR007C PEX31P53203 462 aa2.92□□□□□ -1.94
ATG3YNR007C YTP1P53584 459 aa2.92□□□□□ -1.94
ATG3YNR007C EKI1Q03764 534 aa2.92□□□□□ -1.94
ATG3YNR007C FIN1Q03898 291 aa2.92□□□□□ -1.94
ATG3YNR007C YDR415CQ04033 374 aaPredicted RBP2.92□□□□□ -1.94
ATG3YNR007C SMA2Q04658 369 aa2.92□□□□□ -1.94
ATG3YNR007C GRX8Q05926 109 aa2.92□□□□□ -1.94
ATG3YNR007C ATG26Q06321 1198 aa2.92□□□□□ -1.94
ATG3YNR007C LUC7Q07508 261 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms