RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	DPB11	P47027	764 aa	Predicted RBP	4.66	□□□□□ -1.66
PCL1	YNL289W	INN1	P53901	409 aa		4.66	□□□□□ -1.66
PCL1	YNL289W	YMR018W	Q04364	514 aa		4.66	□□□□□ -1.66
PCL1	YNL289W	YMR317W	Q04893	1140 aa		4.66	□□□□□ -1.66
PCL1	YNL289W	INP53	Q12271	1107 aa		4.66	□□□□□ -1.66
PCL1	YNL289W	TRX1	P22217	103 aa	Known RBP	4.65	□□□□□ -1.67
PCL1	YNL289W	PAP1	P29468	568 aa	Known RBP	4.65	□□□□□ -1.67
PCL1	YNL289W	DBF4	P32325	704 aa		4.65	□□□□□ -1.67
PCL1	YNL289W	HXT1	P32465	570 aa		4.65	□□□□□ -1.67
PCL1	YNL289W	SNU114	P36048	1008 aa	Known RBP	4.65	□□□□□ -1.67
PCL1	YNL289W	ERG10	P41338	398 aa	Known RBP	4.65	□□□□□ -1.67
PCL1	YNL289W	RRT5	P43607	289 aa		4.65	□□□□□ -1.67
PCL1	YNL289W	SNG1	P46950	547 aa		4.65	□□□□□ -1.67
PCL1	YNL289W	ATG27	P46989	271 aa		4.65	□□□□□ -1.67
PCL1	YNL289W	NUP100	Q02629	959 aa		4.65	□□□□□ -1.67
PCL1	YNL289W	OPY2	Q06810	360 aa		4.65	□□□□□ -1.67
PCL1	YNL289W	UBR1	P19812	1950 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	PET123	P17558	318 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	GID7	P25569	745 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	BLI1	P35727	113 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	SWC5	P38326	303 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	RCK2	P38623	610 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	EDC3	P39998	551 aa	Known RBP	4.64	□□□□□ -1.67
PCL1	YNL289W	KAP114	P53067	1004 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	STR3	P53101	465 aa	Known RBP	4.64	□□□□□ -1.67
PCL1	YNL289W	JJJ1	P53863	590 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	YNL040W	P53960	456 aa	Predicted RBP	4.64	□□□□□ -1.67
PCL1	YNL289W	IVY1	Q04934	453 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	RTN1	Q04947	295 aa	Known RBP	4.64	□□□□□ -1.67
PCL1	YNL289W	ATG26	Q06321	1198 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	YLR352W	Q06479	807 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	DAS2	Q12084	232 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	IZH4	Q99393	312 aa		4.64	□□□□□ -1.67
PCL1	YNL289W	SEC63	P14906	663 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	GPI10	P30777	616 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	RPN2	P32565	945 aa	Known RBP	4.63	□□□□□ -1.67
PCL1	YNL289W	SGE1	P33335	543 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	YBL055C	P34220	418 aa	Predicted RBP	4.63	□□□□□ -1.67
PCL1	YNL289W	ATG12	P38316	186 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	UIP3	P39547	235 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	HEM14	P40012	539 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	LCP5	P40079	357 aa	Predicted RBP	4.63	□□□□□ -1.67
PCL1	YNL289W	ATM1	P40416	690 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	YJR079W	P47126	109 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	TRF5	P48561	642 aa	Known RBP	4.63	□□□□□ -1.67
PCL1	YNL289W	PRP24	P49960	444 aa	Known RBP	4.63	□□□□□ -1.67
PCL1	YNL289W	YGL260W	P53056	76 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	PEX31	P53203	462 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	ART5	P53244	586 aa	Known RBP	4.63	□□□□□ -1.67
PCL1	YNL289W	BTN2	P53286	410 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	TIM13	P53299	105 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	ALF1	P53904	254 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	TOF2	Q02208	771 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	YML131W	Q03102	365 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	NGL3	Q03210	505 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	YMR114C	Q04471	368 aa	Known RBP	4.63	□□□□□ -1.67
PCL1	YNL289W	KAP95	Q06142	861 aa	Known RBP	4.63	□□□□□ -1.67
PCL1	YNL289W	NSE1	Q07913	336 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	YMR230W-A	Q3E7B5	62 aa		4.63	□□□□□ -1.67
PCL1	YNL289W	YLR462W	O13556	202 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	ARF2	P19146	181 aa	Known RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	MEI4	P29467	408 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	FMP46	P36141	133 aa	Known RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	DIA4	P38705	446 aa	Predicted RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	YHL049C	P38722	271 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	ANS1	P38832	159 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	CCT4	P39078	528 aa	Known RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	PRM9	P39551	298 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	FLC2	P39719	783 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	YFL064C	P43540	174 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	RTT101	P47050	842 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	ASN2	P49090	572 aa	Known RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	APT1	P49435	187 aa	Known RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	YGR127W	P53275	312 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	RTS3	P53289	263 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	YPL014W	Q02606	381 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	PIR1	Q03178	341 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	SXM1	Q04175	944 aa	Known RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	YTH1	Q06102	208 aa	Predicted RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	APC5	Q08683	685 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	YBL111C	Q3E7Y5	667 aa		4.62	□□□□□ -1.67
PCL1	YNL289W	MEX67	Q99257	599 aa	Known RBP	4.62	□□□□□ -1.67
PCL1	YNL289W	ACC1	Q00955	2233 aa	Known RBP	4.61	□□□□□ -1.67
PCL1	YNL289W	HIS1	P00498	297 aa	Known RBP	4.61	□□□□□ -1.67
PCL1	YNL289W	MSF1	P08425	469 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	SPC110	P32380	944 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	RRN3	P36070	627 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	KAP104	P38217	918 aa	Known RBP	4.61	□□□□□ -1.67
PCL1	YNL289W	PCA1	P38360	1216 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	BUR6	P40096	142 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	AZF1	P41696	914 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	RPS10B	P46784	105 aa	Known RBP	4.61	□□□□□ -1.67
PCL1	YNL289W	AAD10	P47182	288 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	EMC4	P53073	190 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	VAC14	Q06708	880 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	RPS10A	Q08745	105 aa	Predicted RBP	4.61	□□□□□ -1.67
PCL1	YNL289W	OCA6	Q12454	224 aa		4.61	□□□□□ -1.67
PCL1	YNL289W	PHO2	P07269	559 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	CKI1	P20485	582 aa		4.6	□□□□□ -1.67
PCL1	YNL289W	SLY1	P22213	666 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms