RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	IMA3	P0CW40	589 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	IMA4	P0CW41	589 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
CSL4	YNL232W	PRP4	P20053	465 aa	Known RBP	5.42	□□□□□ -1.54
CSL4	YNL232W	MGR1	P25573	417 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	TAH1	P25638	111 aa	Predicted RBP	5.42	□□□□□ -1.54
CSL4	YNL232W	HBS1	P32769	611 aa	Known RBP	5.42	□□□□□ -1.54
CSL4	YNL232W	BEM3	P32873	1128 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	KKQ8	P36004	724 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	MUD2	P36084	527 aa	Known RBP	5.42	□□□□□ -1.54
CSL4	YNL232W	YHR112C	P38716	378 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	AXL2	P38928	823 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	END3	P39013	349 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	SCC4	P40090	624 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	FKH2	P41813	862 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	SOV1	Q04748	898 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	GLO2	Q05584	274 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	IMA2	Q08295	589 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	ICT1	Q12385	394 aa		5.42	□□□□□ -1.54
CSL4	YNL232W	STE2	D6VTK4	431 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	HSP60	P19882	572 aa	Known RBP	5.41	□□□□□ -1.54
CSL4	YNL232W	REC107	P21651	314 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	ATP12	P22135	325 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	YMC1	P32331	307 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	RCK2	P38623	610 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	RPP1	P38786	293 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	VPS52	P39904	641 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	YEN1	P40028	759 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	TPA1	P40032	644 aa	Known RBP	5.41	□□□□□ -1.54
CSL4	YNL232W	YMR134W	P40207	237 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	ICE2	P40499	491 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	BPL1	P48445	690 aa	Predicted RBP	5.41	□□□□□ -1.54
CSL4	YNL232W	SPP2	Q02521	185 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	YPL068C	Q02749	293 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	ATG21	Q02887	496 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	RCN2	Q12044	265 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	RGT2	Q12300	763 aa		5.41	□□□□□ -1.54
CSL4	YNL232W	SSH4	P32343	579 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	HXT1	P32465	570 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	ERG1	P32476	496 aa	Known RBP	5.4	□□□□□ -1.54
CSL4	YNL232W	FMP52	P40008	231 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	MEP1	P40260	492 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	RPL10	P41805	221 aa	Known RBP	5.4	□□□□□ -1.54
CSL4	YNL232W	SEC27	P41811	889 aa	Known RBP	5.4	□□□□□ -1.54
CSL4	YNL232W	TIM54	P47045	478 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	TIS11	P47977	285 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	MUP1	P50276	574 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	MDM34	P53083	459 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	OAZ1	Q02803	292 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	PRP3	Q03338	469 aa	Predicted RBP	5.4	□□□□□ -1.54
CSL4	YNL232W	YMR210W	Q03649	449 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	YLR352W	Q06479	807 aa		5.4	□□□□□ -1.54
CSL4	YNL232W	RPS21A	P0C0V8	87 aa	Known RBP	5.39	□□□□□ -1.55
CSL4	YNL232W	HMG1	P12683	1054 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	MSS116	P15424	664 aa	Known RBP	5.39	□□□□□ -1.55
CSL4	YNL232W	RAD57	P25301	460 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	SRB4	P32569	687 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	SUI1	P32911	108 aa	Known RBP	5.39	□□□□□ -1.55
CSL4	YNL232W	RSM22	P36056	628 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	EFM1	P38732	585 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	TCD1	P38756	429 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	PRP39	P39682	629 aa	Known RBP	5.39	□□□□□ -1.55
CSL4	YNL232W	STB2	P46679	850 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	SEH1	P53011	349 aa	Known RBP	5.39	□□□□□ -1.55
CSL4	YNL232W	MAL11	P53048	616 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	ROG1	P53118	685 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	BTN2	P53286	410 aa		5.39	□□□□□ -1.55
CSL4	YNL232W	NOP58	Q12499	511 aa	Known RBP	5.39	□□□□□ -1.55
CSL4	YNL232W	TEF1	P02994	458 aa	Known RBP	5.38	□□□□□ -1.55
CSL4	YNL232W	SEC53	P07283	254 aa	Known RBP	5.38	□□□□□ -1.55
CSL4	YNL232W	PEP5	P12868	1029 aa		5.38	□□□□□ -1.55
CSL4	YNL232W	STP22	P25604	385 aa		5.38	□□□□□ -1.55
CSL4	YNL232W	APT2	P36973	181 aa		5.38	□□□□□ -1.55
CSL4	YNL232W	YHI9	P38765	294 aa		5.38	□□□□□ -1.55
CSL4	YNL232W	SPC97	P38863	823 aa		5.38	□□□□□ -1.55
CSL4	YNL232W	NPT1	P39683	429 aa	Known RBP	5.38	□□□□□ -1.55
CSL4	YNL232W	DJP1	P40564	432 aa		5.38	□□□□□ -1.55
CSL4	YNL232W	VMA13	P41807	478 aa	Known RBP	5.38	□□□□□ -1.55
CSL4	YNL232W	SNO3	P43544	222 aa		5.38	□□□□□ -1.55
CSL4	YNL232W	BOP2	Q06150	570 aa		5.38	□□□□□ -1.55
CSL4	YNL232W	BRR1	Q99177	341 aa	Predicted RBP	5.38	□□□□□ -1.55
CSL4	YNL232W	STE3	P06783	470 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	COR1	P07256	457 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	MAK32	P23060	363 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	ZIP1	P31111	875 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	CDC5	P32562	705 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	REC104	P33323	182 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	SDH3	P33421	198 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	MTC2	P34246	357 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	DHR2	P36009	735 aa	Predicted RBP	5.37	□□□□□ -1.55
CSL4	YNL232W	HAT2	P39984	401 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	UTP25	P40498	721 aa	Known RBP	5.37	□□□□□ -1.55
CSL4	YNL232W	VHR1	P40522	640 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	APQ12	P40532	138 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	PAC11	P40960	533 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	UBP6	P43593	499 aa	Known RBP	5.37	□□□□□ -1.55
CSL4	YNL232W	RTA1	P53047	317 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	ALF1	P53904	254 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	GRX3	Q03835	250 aa		5.37	□□□□□ -1.55
CSL4	YNL232W	BCH1	Q05029	724 aa		5.37	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms