RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C TRM8Q12009 286 aa2.38□□□□□ -2.03
SGS1YMR190C SLH1P53327 1967 aaKnown RBP2.37□□□□□ -2.03
SGS1YMR190C STE2D6VTK4 431 aa2.37□□□□□ -2.03
SGS1YMR190C SIR3P06701 978 aa2.37□□□□□ -2.03
SGS1YMR190C YBR056WP38081 501 aa2.37□□□□□ -2.03
SGS1YMR190C GUS1P46655 708 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SGS1YMR190C IBA57P47158 497 aa2.37□□□□□ -2.03
SGS1YMR190C COG1P53079 417 aa2.37□□□□□ -2.03
SGS1YMR190C HRI1Q05905 244 aaKnown RBP2.37□□□□□ -2.03
SGS1YMR190C YKL018C-AQ3E7A7 99 aa2.37□□□□□ -2.03
SGS1YMR190C ACC1Q00955 2233 aaKnown RBP2.37□□□□□ -2.03
SGS1YMR190C SPS4P09937 338 aa2.37□□□□□ -2.03
SGS1YMR190C RAP1P11938 827 aa2.37□□□□□ -2.03
SGS1YMR190C RAD14P28519 371 aa2.37□□□□□ -2.03
SGS1YMR190C TPO5P36029 618 aa2.37□□□□□ -2.03
SGS1YMR190C ARN1P38731 627 aa2.37□□□□□ -2.03
SGS1YMR190C UTP9P38882 575 aaKnown RBP2.37□□□□□ -2.03
SGS1YMR190C PIR1Q03178 341 aa2.37□□□□□ -2.03
SGS1YMR190C PFA5Q03289 374 aa2.37□□□□□ -2.03
SGS1YMR190C YOR387CQ08910 206 aa2.37□□□□□ -2.03
SGS1YMR190C APC9Q12107 265 aa2.37□□□□□ -2.03
SGS1YMR190C PER33Q12144 273 aa2.37□□□□□ -2.03
SGS1YMR190C YPL247CQ12523 523 aa2.37□□□□□ -2.03
SGS1YMR190C PHO3P24031 467 aa2.37□□□□□ -2.03
SGS1YMR190C YCL068CP25593 260 aa2.37□□□□□ -2.03
SGS1YMR190C IMP3P32899 183 aaPredicted RBP2.37□□□□□ -2.03
SGS1YMR190C KES1P35844 434 aaKnown RBP2.37□□□□□ -2.03
SGS1YMR190C SNU114P36048 1008 aaKnown RBP2.37□□□□□ -2.03
SGS1YMR190C MNL1P38888 796 aa2.37□□□□□ -2.03
SGS1YMR190C HAT2P39984 401 aa2.37□□□□□ -2.03
SGS1YMR190C JEM1P40358 645 aa2.37□□□□□ -2.03
SGS1YMR190C SEC27P41811 889 aaKnown RBP2.37□□□□□ -2.03
SGS1YMR190C DIA3P52290 468 aa2.37□□□□□ -2.03
SGS1YMR190C MDM34P53083 459 aa2.37□□□□□ -2.03
SGS1YMR190C IST1P53843 298 aaPredicted RBP2.37□□□□□ -2.03
SGS1YMR190C YMR155WQ03795 547 aa2.37□□□□□ -2.03
SGS1YMR190C HMO1Q03973 246 aaKnown RBP2.37□□□□□ -2.03
SGS1YMR190C YEH2Q07950 538 aa2.37□□□□□ -2.03
SGS1YMR190C TAF3Q12297 353 aa2.37□□□□□ -2.03
SGS1YMR190C SPT3P06844 337 aa2.36□□□□□ -2.03
SGS1YMR190C MSN1P22148 382 aa2.36□□□□□ -2.03
SGS1YMR190C TAH1P25638 111 aaPredicted RBP2.36□□□□□ -2.03
SGS1YMR190C HEM3P28789 327 aa2.36□□□□□ -2.03
SGS1YMR190C THI80P35202 319 aa2.36□□□□□ -2.03
SGS1YMR190C PRY2P36110 329 aa2.36□□□□□ -2.03
SGS1YMR190C YJL193WP39542 402 aa2.36□□□□□ -2.03
SGS1YMR190C YIL086CP40503 102 aa2.36□□□□□ -2.03
SGS1YMR190C PKP1P40530 394 aa2.36□□□□□ -2.03
SGS1YMR190C YIL001WP40560 513 aa2.36□□□□□ -2.03
SGS1YMR190C ILM1P47155 203 aa2.36□□□□□ -2.03
SGS1YMR190C IMA1P53051 589 aa2.36□□□□□ -2.03
SGS1YMR190C MRM2P53123 320 aa2.36□□□□□ -2.03
SGS1YMR190C SLM2P53955 656 aa2.36□□□□□ -2.03
SGS1YMR190C YLR460CP54007 376 aa2.36□□□□□ -2.03
SGS1YMR190C URC2Q04411 772 aa2.36□□□□□ -2.03
SGS1YMR190C MRX10Q05648 414 aa2.36□□□□□ -2.03
SGS1YMR190C CRR1Q05790 422 aa2.36□□□□□ -2.03
SGS1YMR190C COS7Q07788 383 aa2.36□□□□□ -2.03
SGS1YMR190C SRN2Q99176 213 aa2.36□□□□□ -2.03
SGS1YMR190C AFI1Q99222 893 aa2.36□□□□□ -2.03
SGS1YMR190C CCW14O13547 238 aa2.36□□□□□ -2.03
SGS1YMR190C CAR1P00812 333 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C CBP6P07253 162 aaPredicted RBP2.36□□□□□ -2.03
SGS1YMR190C SAN1P22470 610 aa2.36□□□□□ -2.03
SGS1YMR190C TIP20P33891 701 aa2.36□□□□□ -2.03
SGS1YMR190C MRP21P38175 177 aa2.36□□□□□ -2.03
SGS1YMR190C FZO1P38297 855 aa2.36□□□□□ -2.03
SGS1YMR190C HSE1P38753 452 aa2.36□□□□□ -2.03
SGS1YMR190C PRM2P40534 656 aa2.36□□□□□ -2.03
SGS1YMR190C PAC11P40960 533 aa2.36□□□□□ -2.03
SGS1YMR190C IDS2P46958 469 aa2.36□□□□□ -2.03
SGS1YMR190C YJR142WP47173 342 aa2.36□□□□□ -2.03
SGS1YMR190C CGI121Q03705 181 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C RBS1Q05672 457 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C BUR2Q05949 395 aa2.36□□□□□ -2.03
SGS1YMR190C UTP21Q06078 939 aaPredicted RBP2.36□□□□□ -2.03
SGS1YMR190C SRL2Q12020 392 aa2.36□□□□□ -2.03
SGS1YMR190C PRS5Q12265 496 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C ATG34Q12292 412 aa2.36□□□□□ -2.03
SGS1YMR190C Q0144Q9ZZW2 109 aa2.36□□□□□ -2.03
SGS1YMR190C GAL7P08431 366 aa2.36□□□□□ -2.03
SGS1YMR190C TRX2P22803 104 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C DBR1P24309 405 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C STE14P32584 239 aa2.36□□□□□ -2.03
SGS1YMR190C MRE11P32829 692 aa2.36□□□□□ -2.03
SGS1YMR190C AST1P35183 429 aa2.36□□□□□ -2.03
SGS1YMR190C OMA1P36163 345 aa2.36□□□□□ -2.03
SGS1YMR190C RPP1P38786 293 aa2.36□□□□□ -2.03
SGS1YMR190C UBA4P38820 440 aa2.36□□□□□ -2.03
SGS1YMR190C HRB1P38922 454 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SGS1YMR190C RPS26AP39938 119 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C RPS26BP39939 119 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C RLP7P40693 322 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C FAR3P46671 204 aa2.36□□□□□ -2.03
SGS1YMR190C ARI1P53111 347 aaKnown RBP2.36□□□□□ -2.03
SGS1YMR190C YMR111CQ04461 462 aaPredicted RBP2.36□□□□□ -2.03
SGS1YMR190C GPB1Q08886 897 aa2.36□□□□□ -2.03
SGS1YMR190C SWI5P08153 709 aa2.36□□□□□ -2.03
SGS1YMR190C UGA1P17649 471 aa2.36□□□□□ -2.03
SGS1YMR190C DBP3P20447 523 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms