RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDE1	YMR145C	NAN1	Q02931	896 aa	Known RBP	7.2	□□□□□ -1.26
NDE1	YMR145C	YMR187C	Q03236	431 aa		7.2	□□□□□ -1.26
NDE1	YMR145C	YPS7	Q06325	596 aa		7.2	□□□□□ -1.26
NDE1	YMR145C	SDO1	Q07953	250 aa	Known RBP	7.2	□□□□□ -1.26
NDE1	YMR145C	TGS1	Q12052	315 aa		7.2	□□□□□ -1.26
NDE1	YMR145C	LEU9	Q12166	604 aa	Known RBP	7.2	□□□□□ -1.26
NDE1	YMR145C	REP2	P03872	296 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	ATP1	P07251	545 aa	Known RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	CBS2	P14905	389 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	PHO81	P17442	1178 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	MET16	P18408	261 aa	Predicted RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	MCM10	P32354	571 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	TSA1	P34760	196 aa	Known RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	YNK1	P36010	153 aa	Known RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	ECM8	P38246	354 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	BIG1	P38813	335 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	MLH1	P38920	769 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	PFA3	P42836	336 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	SAD1	P43589	448 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	IBA57	P47158	497 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	SPC98	P53540	846 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	YPL108W	Q02872	168 aa	Predicted RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	HED1	Q03937	162 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	TDA9	Q04545	1251 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	EMG1	Q06287	252 aa	Known RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	LDB18	Q07887	179 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	REX4	Q08237	289 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	7.19	□□□□□ -1.26	not detected
NDE1	YMR145C	AFI1	Q99222	893 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	GAL4	P04386	881 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	CDC36	P06100	191 aa	Predicted RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	RAD7	P06779	565 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	TRP4	P07285	380 aa	Predicted RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	EMC1	P25574	760 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	MRPL9	P31334	269 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	SHM2	P37291	469 aa	Known RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	TCM62	P38228	572 aa	Known RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	IPI1	P38803	334 aa	Predicted RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	GAB1	P41733	394 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	SIP4	P46954	829 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	RPA34	P47006	233 aa	Predicted RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	TUB4	P53378	473 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	HXT15	P54854	567 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	YDC1	Q02896	317 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	TRS31	Q03337	283 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	SLD5	Q03406	294 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	MUS81	Q04149	632 aa	Predicted RBP	7.19	□□□□□ -1.26
NDE1	YMR145C	CAC2	Q04199	468 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	THI7	Q05998	598 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	CSM4	Q08955	156 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	ACM1	Q08981	209 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	SPC3	Q12133	184 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	NYV1	Q12255	253 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	MED11	Q99278	115 aa		7.19	□□□□□ -1.26
NDE1	YMR145C	PRC1	P00729	532 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	MOD5	P07884	428 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	SPO16	P17122	198 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	PRE1	P22141	198 aa	Known RBP	7.18	□□□□□ -1.26
NDE1	YMR145C	GRR1	P24814	1151 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	RNA14	P25298	677 aa	Known RBP	7.18	□□□□□ -1.26
NDE1	YMR145C	RRP7	P25368	297 aa	Predicted RBP	7.18	□□□□□ -1.26
NDE1	YMR145C	AHC2	P25649	128 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	MCM5	P29496	775 aa	Known RBP	7.18	□□□□□ -1.26
NDE1	YMR145C	ATP11	P32453	318 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	FRE1	P32791	686 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	LST4	P34239	828 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	YHK8	P38776	514 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	GIP4	P39732	760 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	PTI1	P39927	425 aa	Predicted RBP	7.18	□□□□□ -1.26
NDE1	YMR145C	YJL107C	P42947	387 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	NET1	P47035	1189 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	ARH1	P48360	493 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	ACS2	P52910	683 aa	Known RBP	7.18	□□□□□ -1.26
NDE1	YMR145C	YGR017W	P53210	297 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	MSC1	Q03104	513 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	YMR099C	Q03161	297 aa	Known RBP	7.18	□□□□□ -1.26
NDE1	YMR145C	GIS4	Q04233	774 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	YDR109C	Q04585	715 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	HDA2	Q06629	674 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	SFM1	Q12314	213 aa		7.18	□□□□□ -1.26
NDE1	YMR145C	TPK3	P05986	398 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	DCC1	P25559	380 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	NGG1	P32494	702 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	BDF1	P35817	686 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	FMP23	P38231	175 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	MIT1	P40002	666 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	SNN1	P48232	102 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	POP6	P53218	158 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	IDP3	P53982	420 aa	Known RBP	7.17	□□□□□ -1.26
NDE1	YMR145C	HXT11	P54862	567 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	RPL22B	P56628	122 aa	Known RBP	7.17	□□□□□ -1.26
NDE1	YMR145C	SAE3	P89114	91 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	REG1	Q00816	1014 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	SPR28	Q04921	423 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	MRX10	Q05648	414 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	GAS2	Q06135	555 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	SAM4	Q08985	325 aa	Known RBP	7.17	□□□□□ -1.26
NDE1	YMR145C	YOR022C	Q12204	715 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	PSY3	Q12318	242 aa		7.17	□□□□□ -1.26
NDE1	YMR145C	HRT3	Q12347	344 aa		7.17	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms