RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C RAX2Q12465 1220 aa2.49□□□□□ -2.01
VPS20YMR077C NOP4P37838 685 aaKnown RBP2.48□□□□□ -2.01
VPS20YMR077C OM14P38325 134 aa2.48□□□□□ -2.01
VPS20YMR077C OXA1P39952 402 aa2.48□□□□□ -2.01
VPS20YMR077C BIR1P47134 954 aa2.48□□□□□ -2.01
VPS20YMR077C AZR1P50080 613 aa2.48□□□□□ -2.01
VPS20YMR077C ATP22P50273 684 aaPredicted RBP2.48□□□□□ -2.01
VPS20YMR077C DIA1P54005 336 aa2.48□□□□□ -2.01
VPS20YMR077C TPS1Q00764 495 aaKnown RBP2.48□□□□□ -2.01
VPS20YMR077C TAP42Q04372 366 aa2.48□□□□□ -2.01
VPS20YMR077C CMS1Q07897 291 aaKnown RBP2.48□□□□□ -2.01
VPS20YMR077C SEC9P40357 651 aa2.47□□□□□ -2.01
VPS20YMR077C YIF1P53845 314 aaKnown RBP2.47□□□□□ -2.01
VPS20YMR077C NUP116Q02630 1113 aa2.47□□□□□ -2.01
VPS20YMR077C BET5Q03630 159 aa2.47□□□□□ -2.01
VPS20YMR077C RIF2Q06208 395 aa2.47□□□□□ -2.01
VPS20YMR077C ORT1Q12375 292 aa2.47□□□□□ -2.01
VPS20YMR077C MSI1P13712 422 aa2.46□□□□□ -2.02
VPS20YMR077C CBS1P14066 229 aa2.46□□□□□ -2.02
VPS20YMR077C SPB1P25582 841 aaPredicted RBP2.46□□□□□ -2.02
VPS20YMR077C NIP100P33420 868 aa2.46□□□□□ -2.02
VPS20YMR077C GPI18P38211 433 aa2.46□□□□□ -2.02
VPS20YMR077C PCF11P39081 626 aaPredicted RBP2.46□□□□□ -2.02
VPS20YMR077C YGR149WP48236 432 aa2.46□□□□□ -2.02
VPS20YMR077C SMF3Q12078 473 aaPredicted RBP2.46□□□□□ -2.02
VPS20YMR077C SNU66Q12420 587 aaPredicted RBP2.46□□□□□ -2.02
VPS20YMR077C YLR278CQ05854 1341 aa2.45□□□□□ -2.02
VPS20YMR077C FOB1O13329 566 aa2.45□□□□□ -2.02
VPS20YMR077C IDH2P28241 369 aaKnown RBP2.45□□□□□ -2.02
VPS20YMR077C YHR054CP38780 354 aa2.45□□□□□ -2.02
VPS20YMR077C BAT1P38891 393 aaKnown RBP2.45□□□□□ -2.02
VPS20YMR077C YIL029CP40538 142 aa2.45□□□□□ -2.02
VPS20YMR077C KTR6P54070 446 aa2.45□□□□□ -2.02
VPS20YMR077C GIR2Q03768 265 aaPredicted RBP2.45□□□□□ -2.02
VPS20YMR077C YET2Q04210 160 aa2.45□□□□□ -2.02
VPS20YMR077C BCH1Q05029 724 aa2.45□□□□□ -2.02
VPS20YMR077C REX4Q08237 289 aa2.45□□□□□ -2.02
VPS20YMR077C RMD5Q12508 421 aa2.45□□□□□ -2.02
VPS20YMR077C CDC50P25656 391 aa2.44□□□□□ -2.02
VPS20YMR077C ALD5P40047 520 aaKnown RBP2.44□□□□□ -2.02
VPS20YMR077C YFL012WP43580 148 aa2.44□□□□□ -2.02
VPS20YMR077C TWF1P53250 332 aa2.44□□□□□ -2.02
VPS20YMR077C MEP3P53390 489 aa2.44□□□□□ -2.02
VPS20YMR077C SKI7Q08491 747 aaPredicted RBP2.44□□□□□ -2.02
VPS20YMR077C MAS2P11914 482 aa2.43□□□□□ -2.02
VPS20YMR077C SPO7P18410 259 aa2.43□□□□□ -2.02
VPS20YMR077C ESL1P40456 1118 aa2.43□□□□□ -2.02
VPS20YMR077C HMS2P47175 358 aa2.43□□□□□ -2.02
VPS20YMR077C MRX6P48564 524 aa2.43□□□□□ -2.02
VPS20YMR077C YIP5P53108 310 aa2.43□□□□□ -2.02
VPS20YMR077C MCH1Q07376 486 aa2.43□□□□□ -2.02
VPS20YMR077C SEM1O94742 89 aa2.42□□□□□ -2.02
VPS20YMR077C CST26P38226 397 aa2.42□□□□□ -2.02
VPS20YMR077C TPM2P40414 161 aa2.42□□□□□ -2.02
VPS20YMR077C UPF3P48412 387 aaKnown RBP2.42□□□□□ -2.02
VPS20YMR077C YGL262WP53054 175 aa2.42□□□□□ -2.02
VPS20YMR077C FOL3Q12676 427 aaPredicted RBP2.42□□□□□ -2.02
VPS20YMR077C SPS4P09937 338 aa2.41□□□□□ -2.02
VPS20YMR077C RAD57P25301 460 aa2.41□□□□□ -2.02
VPS20YMR077C PWP2P25635 923 aaKnown RBP2.41□□□□□ -2.02
VPS20YMR077C SEC66P33754 206 aa2.41□□□□□ -2.02
VPS20YMR077C VPS24P36095 224 aaKnown RBP2.41□□□□□ -2.02
VPS20YMR077C MET28P40573 187 aa2.41□□□□□ -2.02
VPS20YMR077C VTC2P43585 828 aa2.41□□□□□ -2.02
VPS20YMR077C SFH5P47008 294 aa2.41□□□□□ -2.02
VPS20YMR077C SYF1Q04048 859 aaPredicted RBP2.41□□□□□ -2.02
VPS20YMR077C PIN3Q06449 215 aa2.41□□□□□ -2.02
VPS20YMR077C YGK3Q12222 375 aaPredicted RBP2.41□□□□□ -2.02
VPS20YMR077C GPH1P06738 902 aaKnown RBP2.4□□□□□ -2.03
VPS20YMR077C ZUO1P32527 433 aaKnown RBP2.4□□□□□ -2.03
VPS20YMR077C MUD2P36084 527 aaKnown RBP2.4□□□□□ -2.03
VPS20YMR077C SAS2P40963 338 aa2.4□□□□□ -2.03
VPS20YMR077C PGU1P47180 361 aa2.4□□□□□ -2.03
VPS20YMR077C RTN1Q04947 295 aaKnown RBP2.4□□□□□ -2.03
VPS20YMR077C OLE1P21147 510 aaKnown RBP2.39□□□□□ -2.03
VPS20YMR077C TPS2P31688 896 aaKnown RBP2.39□□□□□ -2.03
VPS20YMR077C DOT5P40553 215 aa2.39□□□□□ -2.03
VPS20YMR077C BNS1P50084 137 aa2.39□□□□□ -2.03
VPS20YMR077C MST27P53176 234 aa2.39□□□□□ -2.03
VPS20YMR077C KTR5P53966 522 aaPredicted RBP2.39□□□□□ -2.03
VPS20YMR077C CMC1P36064 111 aa2.38□□□□□ -2.03
VPS20YMR077C SBE22P38814 852 aa2.38□□□□□ -2.03
VPS20YMR077C COX14P39103 70 aa2.38□□□□□ -2.03
VPS20YMR077C ATG18P43601 500 aa2.38□□□□□ -2.03
VPS20YMR077C YJR011CP47086 261 aaPredicted RBP2.38□□□□□ -2.03
VPS20YMR077C CLN1P20437 546 aa2.37□□□□□ -2.03
VPS20YMR077C CTR86P25355 563 aa2.37□□□□□ -2.03
VPS20YMR077C RRP1P35178 278 aaPredicted RBP2.37□□□□□ -2.03
VPS20YMR077C PFF1P38244 976 aa2.37□□□□□ -2.03
VPS20YMR077C VHC1P38329 1120 aa2.37□□□□□ -2.03
VPS20YMR077C YER184CP39961 794 aa2.37□□□□□ -2.03
VPS20YMR077C VMA13P41807 478 aaKnown RBP2.37□□□□□ -2.03
VPS20YMR077C RMD8P43620 662 aa2.37□□□□□ -2.03
VPS20YMR077C YML133CQ03099 1374 aa2.36□□□□□ -2.03
VPS20YMR077C YLL067CQ07888 1374 aa2.36□□□□□ -2.03
VPS20YMR077C YLL066CQ99208 1374 aa2.36□□□□□ -2.03
VPS20YMR077C RIP1P08067 215 aa2.36□□□□□ -2.03
VPS20YMR077C MRPL27P36526 146 aaPredicted RBP2.36□□□□□ -2.03
VPS20YMR077C SLF1Q12034 447 aaKnown RBP2.36□□□□□ -2.03
VPS20YMR077C ILV5P06168 395 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms