RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	TPM1	P17536	199 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	RPB8	P20436	146 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	GID7	P25569	745 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	SPC110	P32380	944 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	SOF1	P33750	489 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	YMR262W	P38430	313 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	SMF2	P38778	549 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	MET30	P39014	640 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	MSE1	P48525	536 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	PDR16	P53860	351 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	SLU7	Q02775	382 aa	Known RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	INA17	Q02888	182 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	YDR415C	Q04033	374 aa	Predicted RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	YLR122C	Q12312	125 aa		1.24	□□□□□ -2.21
CLU1	YMR012W	RRP36	Q12481	300 aa	Predicted RBP	1.24	□□□□□ -2.21
CLU1	YMR012W	PMR1	P13586	950 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	POP5	P28005	173 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YKR073C	P36153	106 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YHR210C	P38893	341 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YHB1	P39676	399 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	YEL020C	P39994	560 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	MND2	P40577	368 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	CCT7	P42943	550 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	VEL1	P53058	206 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	GTR2	P53290	341 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YNL234W	P53857	426 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YNL143C	P53908	130 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	ALG11	P53954	548 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	RNY1	Q02933	434 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	ECM18	Q04623	453 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	CTS2	Q06350	511 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YPL191C	Q08930	360 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	RRI1	Q12468	440 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	LAA1	P39526	2014 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	CHO1	P08456	276 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	RPB2	P08518	1224 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	YML003W	P0CF16	290 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	RPL42A	P0CX27	106 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	RPL42B	P0CX28	106 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	HSC82	P15108	705 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	1.23	□□□□□ -2.21	not detected
CLU1	YMR012W	CLN1	P20437	546 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	MSB1	P21339	1137 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	PEX1	P24004	1043 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	SUA5	P32579	426 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	RPT5	P33297	434 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	KDX1	P36005	433 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	RSM22	P36056	628 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	SRX1	P36077	127 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	RTC2	P38279	296 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	MIC12	P38341	106 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	TOS3	P43637	560 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	ATG4	P53867	494 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	ASI2	P53895	289 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	APM1	Q00776	475 aa	Predicted RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	ACL4	Q03771	387 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YMR310C	Q04867	317 aa	Predicted RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	YDL177C	Q12257	170 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	TEL1	P38110	2787 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	MF(ALPHA)1	P01149	165 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	SNF3	P10870	884 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	KIN3	P22209	435 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	HXT2	P23585	541 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YKL102C	P34249	101 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	CTF13	P35203	478 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	CMC1	P36064	111 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	YBR139W	P38109	508 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	ZTA1	P38230	334 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	GCD10	P41814	478 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	SNG1	P46950	547 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	FHN1	P53279	174 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	RPT4	P53549	437 aa	Known RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	SNF12	P53628	566 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	GOR1	P53839	350 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	AIM6	Q07716	390 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	ADY3	Q07732	790 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	FMP40	Q08968	688 aa	Predicted RBP	1.23	□□□□□ -2.21
CLU1	YMR012W	YLL058W	Q12198	575 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	SCM3	Q12334	223 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	RKM5	Q12367	367 aa		1.23	□□□□□ -2.21
CLU1	YMR012W	MLP1	Q02455	1875 aa	Known RBP	1.22	□□□□□ -2.21
CLU1	YMR012W	PHO2	P07269	559 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	RPL31B	P0C2H9	113 aa	Known RBP	1.22	□□□□□ -2.21
CLU1	YMR012W	TOD6	P34219	525 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	SCO2	P38072	301 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	TCD1	P38756	429 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	YIL060W	P40519	144 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	QRI1	P43123	477 aa	Known RBP	1.22	□□□□□ -2.21
CLU1	YMR012W	BST1	P43571	1029 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	FLC3	P53121	802 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	STD1	Q02794	444 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	RLI1	Q03195	608 aa	Known RBP	1.22	□□□□□ -2.21
CLU1	YMR012W	YLR224W	Q05947	369 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	CUR1	Q06469	252 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	YDL218W	Q07629	317 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	RUP1	Q12242	671 aa		1.22	□□□□□ -2.21
CLU1	YMR012W	PRS5	Q12265	496 aa	Known RBP	1.22	□□□□□ -2.21
CLU1	YMR012W	TFB5	Q3E7C1	72 aa	Predicted RBP	1.22	□□□□□ -2.21
CLU1	YMR012W	BRR2	P32639	2163 aa	Known RBP	1.22	□□□□□ -2.21
CLU1	YMR012W	DST1	P07273	309 aa		1.22	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms