RNA–Protein interactions for RNA: YLR306W

UBC12, Transcript of Enzyme that mediates the conjugation of Rub1p, yeastyeast

Gene UBC12, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC12YLR306W SSU1P41930 458 aa3.62□□□□□ -1.83
UBC12YLR306W TWF1P53250 332 aa3.62□□□□□ -1.83
UBC12YLR306W YNR048WP53740 393 aa3.62□□□□□ -1.83
UBC12YLR306W CUE5Q08412 411 aaKnown RBP3.62□□□□□ -1.83
UBC12YLR306W RPO21P04050 1733 aaKnown RBP3.61□□□□□ -1.83
UBC12YLR306W PAN1P32521 1480 aa3.61□□□□□ -1.83
UBC12YLR306W CYC3P06182 269 aa3.61□□□□□ -1.83
UBC12YLR306W MRPL10P36520 322 aa3.61□□□□□ -1.83
UBC12YLR306W UTP18P40362 594 aaPredicted RBP3.61□□□□□ -1.83
UBC12YLR306W ECM27P47144 725 aa3.61□□□□□ -1.83
UBC12YLR306W DSL1P53847 754 aa3.61□□□□□ -1.83
UBC12YLR306W SNX3Q08826 162 aaKnown RBP3.61□□□□□ -1.83
UBC12YLR306W MMS22Q06164 1454 aa3.6□□□□□ -1.83
UBC12YLR306W SPB1P25582 841 aaPredicted RBP3.6□□□□□ -1.83
UBC12YLR306W RAD14P28519 371 aa3.6□□□□□ -1.83
UBC12YLR306W CST26P38226 397 aa3.6□□□□□ -1.83
UBC12YLR306W RMD9P53140 646 aaKnown RBP3.6□□□□□ -1.83
UBC12YLR306W KTR5P53966 522 aaPredicted RBP3.6□□□□□ -1.83
UBC12YLR306W YBL111CQ3E7Y5 667 aa3.6□□□□□ -1.83
UBC12YLR306W MLP2P40457 1679 aa3.59□□□□□ -1.83
UBC12YLR306W HIS4P00815 799 aaKnown RBP3.59□□□□□ -1.83
UBC12YLR306W SLY1P22213 666 aa3.59□□□□□ -1.83
UBC12YLR306W PRP21P32524 280 aaPredicted RBP3.59□□□□□ -1.83
UBC12YLR306W MUD1P32605 298 aaKnown RBP3.59□□□□□ -1.83
UBC12YLR306W YEL057CP39983 233 aa3.59□□□□□ -1.83
UBC12YLR306W VMA13P41807 478 aaKnown RBP3.59□□□□□ -1.83
UBC12YLR306W YJR085CP47131 105 aaKnown RBP3.59□□□□□ -1.83
UBC12YLR306W YGR149WP48236 432 aa3.59□□□□□ -1.83
UBC12YLR306W YDR239CQ03780 787 aa3.59□□□□□ -1.83
UBC12YLR306W HSP31Q04432 237 aa3.59□□□□□ -1.83
UBC12YLR306W YDR056CQ12025 205 aa3.59□□□□□ -1.83
UBC12YLR306W ENT1Q12518 454 aa3.59□□□□□ -1.83
UBC12YLR306W RTP1Q12751 981 aa3.59□□□□□ -1.83
UBC12YLR306W GCN4P03069 281 aa3.58□□□□□ -1.84
UBC12YLR306W AFG1P32317 509 aa3.58□□□□□ -1.84
UBC12YLR306W NIP100P33420 868 aa3.58□□□□□ -1.84
UBC12YLR306W DOT5P40553 215 aa3.58□□□□□ -1.84
UBC12YLR306W FRE4P53746 719 aa3.58□□□□□ -1.84
UBC12YLR306W YDR387CQ04162 555 aa3.58□□□□□ -1.84
UBC12YLR306W SGT1Q08446 395 aa3.58□□□□□ -1.84
UBC12YLR306W SMC4Q12267 1418 aa3.58□□□□□ -1.84
UBC12YLR306W VTH1P40438 1549 aa3.58□□□□□ -1.84
UBC12YLR306W VTH2P40890 1549 aa3.58□□□□□ -1.84
UBC12YLR306W ARG4P04076 463 aaPredicted RBP3.57□□□□□ -1.84
UBC12YLR306W TOP1P04786 769 aa3.57□□□□□ -1.84
UBC12YLR306W OCA4P25366 362 aa3.57□□□□□ -1.84
UBC12YLR306W APE2P32454 952 aaKnown RBP3.57□□□□□ -1.84
UBC12YLR306W IOC4Q04213 475 aa3.57□□□□□ -1.84
UBC12YLR306W PLP2Q12017 286 aa3.57□□□□□ -1.84
UBC12YLR306W SPP41P38904 1435 aa3.56□□□□□ -1.84
UBC12YLR306W YLR278CQ05854 1341 aa3.56□□□□□ -1.84
UBC12YLR306W TEF1P02994 458 aaKnown RBP3.56□□□□□ -1.84
UBC12YLR306W NPL6P32832 435 aa3.56□□□□□ -1.84
UBC12YLR306W CMC1P36064 111 aa3.56□□□□□ -1.84
UBC12YLR306W AIM10P39965 576 aaKnown RBP3.56□□□□□ -1.84
UBC12YLR306W MET5P47169 1442 aa3.55□□□□□ -1.84
UBC12YLR306W TRM732Q03496 1420 aa3.55□□□□□ -1.84
UBC12YLR306W BNI1P41832 1953 aa3.55□□□□□ -1.84
UBC12YLR306W YHR131CP38835 850 aa3.55□□□□□ -1.84
UBC12YLR306W LYS1P38998 373 aaRIP-Chip data3.55□□□□□ -1.84not detected
UBC12YLR306W RMD8P43620 662 aa3.55□□□□□ -1.84
UBC12YLR306W RTS3P53289 263 aa3.55□□□□□ -1.84
UBC12YLR306W ATG29Q12092 213 aa3.55□□□□□ -1.84
UBC12YLR306W ULS1Q08562 1619 aa3.55□□□□□ -1.84
UBC12YLR306W MYO4P32492 1471 aa3.54□□□□□ -1.84
UBC12YLR306W IDH2P28241 369 aaKnown RBP3.54□□□□□ -1.84
UBC12YLR306W CSE2P33308 149 aa3.54□□□□□ -1.84
UBC12YLR306W SIM1P40472 476 aa3.54□□□□□ -1.84
UBC12YLR306W VTC2P43585 828 aa3.54□□□□□ -1.84
UBC12YLR306W ARE2P53629 642 aaKnown RBP3.54□□□□□ -1.84
UBC12YLR306W GIR2Q03768 265 aaPredicted RBP3.54□□□□□ -1.84
UBC12YLR306W ORT1Q12375 292 aa3.54□□□□□ -1.84
UBC12YLR306W SPO14P36126 1683 aa3.53□□□□□ -1.84
UBC12YLR306W SPS4P09937 338 aa3.53□□□□□ -1.84
UBC12YLR306W SNT1P25357 1226 aa3.53□□□□□ -1.84
UBC12YLR306W VID24P38263 362 aa3.53□□□□□ -1.84
UBC12YLR306W HXT14P42833 540 aa3.53□□□□□ -1.84
UBC12YLR306W SYF1Q04048 859 aaPredicted RBP3.53□□□□□ -1.84
UBC12YLR306W SNQ2P32568 1501 aaKnown RBP3.53□□□□□ -1.84
UBC12YLR306W VPS15P22219 1454 aa3.53□□□□□ -1.84
UBC12YLR306W NUP159P40477 1460 aa3.53□□□□□ -1.84
UBC12YLR306W TSC11P40061 1430 aa3.53□□□□□ -1.85
UBC12YLR306W DOP1Q03921 1698 aa3.52□□□□□ -1.85
UBC12YLR306W GPH1P06738 902 aaKnown RBP3.52□□□□□ -1.85
UBC12YLR306W SEC63P14906 663 aa3.52□□□□□ -1.85
UBC12YLR306W RPI1P23250 407 aaKnown RBP3.52□□□□□ -1.85
UBC12YLR306W PMT1P33775 817 aa3.52□□□□□ -1.85
UBC12YLR306W RMD5Q12508 421 aa3.52□□□□□ -1.85
UBC12YLR306W GEA2P39993 1459 aaKnown RBP3.52□□□□□ -1.85
UBC12YLR306W YML133CQ03099 1374 aa3.51□□□□□ -1.85
UBC12YLR306W YLL067CQ07888 1374 aa3.51□□□□□ -1.85
UBC12YLR306W YLL066CQ99208 1374 aa3.51□□□□□ -1.85
UBC12YLR306W RIP1P08067 215 aa3.51□□□□□ -1.85
UBC12YLR306W YHR054CP38780 354 aa3.51□□□□□ -1.85
UBC12YLR306W SAS2P40963 338 aa3.51□□□□□ -1.85
UBC12YLR306W YIF1P53845 314 aaKnown RBP3.51□□□□□ -1.85
UBC12YLR306W RQC1Q05468 723 aaKnown RBP3.51□□□□□ -1.85
UBC12YLR306W LTE1P07866 1435 aa3.51□□□□□ -1.85
UBC12YLR306W PDR15Q04182 1529 aaKnown RBP3.5□□□□□ -1.85
UBC12YLR306W MET18P40469 1032 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms