RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A IRC6P43615 237 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A NMD5P46970 1048 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A PUS4P48567 403 aaKnown RBP1.71□□□□□ -2.14
YLR035C-AYLR035C-A NSA1P53136 463 aaPredicted RBP1.71□□□□□ -2.14
YLR035C-AYLR035C-A MPP6P53725 186 aaPredicted RBP1.71□□□□□ -2.14
YLR035C-AYLR035C-A AAT1Q01802 451 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A MAK10Q02197 733 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A TAF12Q03761 539 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A GIS1Q03833 894 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A CSN9Q03981 162 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A PPN1Q04119 674 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A YET3Q07451 203 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A THP3Q12049 470 aaKnown RBP1.71□□□□□ -2.14
YLR035C-AYLR035C-A NSL1Q12143 216 aa1.71□□□□□ -2.14
YLR035C-AYLR035C-A AHA1Q12449 350 aaKnown RBP1.71□□□□□ -2.14
YLR035C-AYLR035C-A CAT8P39113 1433 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A STU1P38198 1513 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A SSA3P09435 649 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A VMA16P23968 213 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A BUD23P25627 275 aaPredicted RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A RNP1P32385 249 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A PET309P32522 965 aaPredicted RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A HCS1P34243 683 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A KES1P35844 434 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A MYO3P36006 1272 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A SNU114P36048 1008 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A MSS2P40990 351 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A PAC10P48363 199 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A PRP24P49960 444 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A IMD3P50095 523 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A TAF6P53040 516 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A YGL242CP53066 181 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A YGL117WP53133 265 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A CUE3P53137 624 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A NOP13P53883 403 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
YLR035C-AYLR035C-A TMA20P89886 181 aaPredicted RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A MTD1Q02046 320 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A YPL107WQ02873 248 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A PRP42Q03776 544 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A YMR027WQ04371 470 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A ARP10Q04549 284 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A RCO1Q04779 684 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A VPS38Q05919 439 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A BUR2Q05949 395 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A DCS1Q06151 350 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A MRI1Q06489 411 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
YLR035C-AYLR035C-A SSP2Q08646 371 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A HER1Q12276 1246 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A ISN1Q99312 450 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A TAD3Q9URQ3 322 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A TDH1P00360 332 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A RPS28BP0C0X0 67 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A SAM1P10659 382 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A RPL4AP10664 362 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A DSS4P32601 143 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A PPQ1P32945 549 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A BUD2P33314 1104 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A STB6P36085 766 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A DAD2P36162 133 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A STT3P39007 718 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A CCT6P39079 546 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A YJL193WP39542 402 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A NPR2P39923 615 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A HPM1P40481 377 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A FMC1P40491 155 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A FMP32P43557 207 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A TRS85P46944 698 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A NIT2P47016 307 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A RPL4BP49626 362 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A PSP1P50896 841 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A PIB2P53191 635 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A SOL4P53315 255 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A RIM13Q03792 727 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A RPN9Q04062 393 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A BNA7Q04066 261 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A PDS5Q04264 1277 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A UAF30Q08747 228 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A GET4Q12125 312 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A GRX6Q12438 231 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A ZPS1Q12512 249 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A CTF3Q12748 733 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A RPS28AQ3E7X9 67 aaPredicted RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A NBL1Q3E7Y6 73 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A SPT6P23615 1451 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A SEM1O94742 89 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A RPL25P04456 142 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A SEC53P07283 254 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A TCP1P12612 559 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A PMR1P13586 950 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A PRP16P15938 1071 aaPredicted RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A AMD2P22580 549 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A RPS5P26783 225 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A MCM4P30665 933 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A HEM12P32347 362 aaPredicted RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A ECM25P32525 599 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A SRB2P34162 210 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A PRX1P34227 261 aaKnown RBP1.7□□□□□ -2.14
YLR035C-AYLR035C-A NUP133P36161 1157 aa1.7□□□□□ -2.14
YLR035C-AYLR035C-A GND1P38720 489 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms