RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C CBS2P14905 389 aa3.82□□□□□ -1.8
SPT23YKL020C URA6P15700 204 aa3.82□□□□□ -1.8
SPT23YKL020C SAR1P20606 190 aaKnown RBP3.82□□□□□ -1.8
SPT23YKL020C RAM1P22007 431 aa3.82□□□□□ -1.8
SPT23YKL020C AIM17P23180 465 aaKnown RBP3.82□□□□□ -1.8
SPT23YKL020C MIR1P23641 311 aaKnown RBP3.82□□□□□ -1.8
SPT23YKL020C PER1P25625 357 aa3.82□□□□□ -1.8
SPT23YKL020C YIM1P28625 365 aa3.82□□□□□ -1.8
SPT23YKL020C SFP1P32432 683 aa3.82□□□□□ -1.8
SPT23YKL020C SCM4P32564 187 aa3.82□□□□□ -1.8
SPT23YKL020C YSC84P32793 468 aa3.82□□□□□ -1.8
SPT23YKL020C CST26P38226 397 aa3.82□□□□□ -1.8
SPT23YKL020C YBP1P38315 674 aa3.82□□□□□ -1.8
SPT23YKL020C URA8P38627 578 aaPredicted RBP3.82□□□□□ -1.8
SPT23YKL020C YHR078WP38799 552 aa3.82□□□□□ -1.8
SPT23YKL020C MRPS18P42847 217 aa3.82□□□□□ -1.8
SPT23YKL020C PMT3P47190 753 aa3.82□□□□□ -1.8
SPT23YKL020C IMA1P53051 589 aa3.82□□□□□ -1.8
SPT23YKL020C ATF2P53296 535 aa3.82□□□□□ -1.8
SPT23YKL020C HXT15P54854 567 aa3.82□□□□□ -1.8
SPT23YKL020C YMR099CQ03161 297 aaKnown RBP3.82□□□□□ -1.8
SPT23YKL020C TRM82Q03774 444 aa3.82□□□□□ -1.8
SPT23YKL020C ARA2Q04212 335 aa3.82□□□□□ -1.8
SPT23YKL020C YDR278CQ05612 105 aa3.82□□□□□ -1.8
SPT23YKL020C UTP21Q06078 939 aaPredicted RBP3.82□□□□□ -1.8
SPT23YKL020C YPR078CQ06813 372 aa3.82□□□□□ -1.8
SPT23YKL020C LDB18Q07887 179 aa3.82□□□□□ -1.8
SPT23YKL020C THI20Q08224 551 aa3.82□□□□□ -1.8
SPT23YKL020C SYC1Q08553 188 aaPredicted RBP3.82□□□□□ -1.8
SPT23YKL020C YOP1Q12402 180 aa3.82□□□□□ -1.8
SPT23YKL020C PHR1P05066 565 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SPT23YKL020C SIR1P21691 654 aa3.81□□□□□ -1.8
SPT23YKL020C CHA1P25379 360 aaKnown RBP3.81□□□□□ -1.8
SPT23YKL020C BET3P36149 193 aa3.81□□□□□ -1.8
SPT23YKL020C MRPL3P36516 390 aa3.81□□□□□ -1.8
SPT23YKL020C GIC1P38785 314 aa3.81□□□□□ -1.8
SPT23YKL020C CIN1P40987 1014 aa3.81□□□□□ -1.8
SPT23YKL020C YJL107CP42947 387 aa3.81□□□□□ -1.8
SPT23YKL020C ALR2P43553 858 aa3.81□□□□□ -1.8
SPT23YKL020C MNN5P46982 586 aa3.81□□□□□ -1.8
SPT23YKL020C TPN1P53099 579 aa3.81□□□□□ -1.8
SPT23YKL020C AIM14P53109 570 aa3.81□□□□□ -1.8
SPT23YKL020C YGR026WP53217 278 aa3.81□□□□□ -1.8
SPT23YKL020C YAP1802P53309 568 aa3.81□□□□□ -1.8
SPT23YKL020C COQ6P53318 479 aa3.81□□□□□ -1.8
SPT23YKL020C OCA2P53949 197 aa3.81□□□□□ -1.8
SPT23YKL020C KTR5P53966 522 aaPredicted RBP3.81□□□□□ -1.8
SPT23YKL020C YMR155WQ03795 547 aa3.81□□□□□ -1.8
SPT23YKL020C ZEO1Q08245 113 aa3.81□□□□□ -1.8
SPT23YKL020C ENV9Q08651 330 aa3.81□□□□□ -1.8
SPT23YKL020C NSL1Q12143 216 aa3.81□□□□□ -1.8
SPT23YKL020C YRR1Q12172 810 aa3.81□□□□□ -1.8
SPT23YKL020C PSY3Q12318 242 aa3.81□□□□□ -1.8
SPT23YKL020C SPE4Q12455 300 aa3.81□□□□□ -1.8
SPT23YKL020C ARG82P07250 355 aa3.81□□□□□ -1.8
SPT23YKL020C MSF1P08425 469 aa3.81□□□□□ -1.8
SPT23YKL020C ARO3P14843 370 aaKnown RBP3.81□□□□□ -1.8
SPT23YKL020C COQ1P18900 473 aa3.81□□□□□ -1.8
SPT23YKL020C SPO23P33757 523 aa3.81□□□□□ -1.8
SPT23YKL020C AME1P38313 324 aa3.81□□□□□ -1.8
SPT23YKL020C PCM1P38628 557 aaKnown RBP3.81□□□□□ -1.8
SPT23YKL020C CRG1P38892 291 aaRIP-Chip data3.81□□□□□ -1.8not detected
SPT23YKL020C YKE4P40544 346 aa3.81□□□□□ -1.8
SPT23YKL020C HXT10P43581 546 aa3.81□□□□□ -1.8
SPT23YKL020C SNG1P46950 547 aa3.81□□□□□ -1.8
SPT23YKL020C IRC18P47056 224 aa3.81□□□□□ -1.8
SPT23YKL020C UBC12P52491 188 aa3.81□□□□□ -1.8
SPT23YKL020C ACS2P52910 683 aaKnown RBP3.81□□□□□ -1.8
SPT23YKL020C YGR250CP53316 781 aaKnown RBP3.81□□□□□ -1.8
SPT23YKL020C MPP6P53725 186 aaPredicted RBP3.81□□□□□ -1.8
SPT23YKL020C BUD17P53727 317 aa3.81□□□□□ -1.8
SPT23YKL020C DIA1P54005 336 aa3.81□□□□□ -1.8
SPT23YKL020C YPS7Q06325 596 aa3.81□□□□□ -1.8
SPT23YKL020C SAM4Q08985 325 aaKnown RBP3.81□□□□□ -1.8
SPT23YKL020C YLR053CQ12026 108 aa3.81□□□□□ -1.8
SPT23YKL020C BMT6Q12291 365 aa3.81□□□□□ -1.8
SPT23YKL020C HRT3Q12347 344 aa3.81□□□□□ -1.8
SPT23YKL020C TPK3P05986 398 aa3.8□□□□□ -1.8
SPT23YKL020C DST1P07273 309 aa3.8□□□□□ -1.8
SPT23YKL020C RPL3P14126 387 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C PHO81P17442 1178 aa3.8□□□□□ -1.8
SPT23YKL020C ECM25P32525 599 aa3.8□□□□□ -1.8
SPT23YKL020C KAP122P32767 1081 aa3.8□□□□□ -1.8
SPT23YKL020C BEM3P32873 1128 aa3.8□□□□□ -1.8
SPT23YKL020C SER1P33330 395 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C RPS1AP33442 255 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C YKL077WP36081 392 aa3.8□□□□□ -1.8
SPT23YKL020C RRT2P38332 387 aa3.8□□□□□ -1.8
SPT23YKL020C SEC72P39742 193 aaKnown RBP3.8□□□□□ -1.8
SPT23YKL020C CHS6P40955 746 aa3.8□□□□□ -1.8
SPT23YKL020C YGR201CP42936 225 aa3.8□□□□□ -1.8
SPT23YKL020C CAF16P43569 289 aa3.8□□□□□ -1.8
SPT23YKL020C HLJ1P48353 224 aa3.8□□□□□ -1.8
SPT23YKL020C SLD3P53135 668 aa3.8□□□□□ -1.8
SPT23YKL020C GTF1P53260 183 aaPredicted RBP3.8□□□□□ -1.8
SPT23YKL020C YCL001W-AP87012 153 aa3.8□□□□□ -1.8
SPT23YKL020C TIM10P87108 93 aa3.8□□□□□ -1.8
SPT23YKL020C SKY1Q03656 742 aa3.8□□□□□ -1.8
SPT23YKL020C YDL086WQ07505 273 aa3.8□□□□□ -1.8
SPT23YKL020C COBP00163 385 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms