RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	MRPL50	P53724	139 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	TEX1	P53851	422 aa	Known RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	BET4	Q00618	327 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	YDR109C	Q04585	715 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	YMR226C	Q05016	267 aa	Known RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	RDR1	Q08904	546 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	DAP1	Q12091	152 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	YOR012W	Q12351	137 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	SEY1	Q99287	776 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	ESC1	Q03661	1658 aa	Known RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	EDE1	P34216	1381 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	MSF1	P08425	469 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	CDC6	P09119	513 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	YAK1	P14680	807 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	SEC63	P14906	663 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	YCP4	P25349	247 aa	Known RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	CSM1	P25651	190 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	GAC1	P28006	793 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	AIM3	P38266	947 aa	Known RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	SPP381	P38282	291 aa	Predicted RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	ARO9	P38840	513 aa	Predicted RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	SPC97	P38863	823 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	YHR210C	P38893	341 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	PCF11	P39081	626 aa	Predicted RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	ELO1	P39540	310 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	HIT1	P46973	164 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	YJL118W	P47022	219 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	MPS3	P47069	682 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	SPC98	P53540	846 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	STD1	Q02794	444 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	ENT5	Q03769	411 aa	Known RBP	4.16	□□□□□ -1.74
CDC6	YJL194W	YMR160W	Q03823	816 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	VPS74	Q06385	345 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	YDL144C	Q07589	356 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	TGS1	Q12052	315 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	SPO24	Q3E752	67 aa		4.16	□□□□□ -1.74
CDC6	YJL194W	RAD9	P14737	1309 aa		4.15	□□□□□ -1.74
CDC6	YJL194W	GEA2	P39993	1459 aa	Known RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	COX1	P00401	534 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	RHO2	P06781	192 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	TUB3	P09734	445 aa	Known RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	YLL053C	P0CD98	152 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	CWP1	P28319	239 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	FRE1	P32791	686 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	VPS51	P36116	164 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	AIM29	P36154	155 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	RPF2	P36160	344 aa	Known RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	MAK5	P38112	773 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	PPS1	P38148	807 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	RTC2	P38279	296 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	RPP1	P38786	293 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	RTT107	P38850	1070 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	CIN4	P39110	191 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	PRM9	P39551	298 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	URM1	P40554	99 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	BNA3	P47039	444 aa	Known RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	YGL108C	P53139	140 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	VPS73	P53142	486 aa	Known RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	APM1	Q00776	475 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	MRP51	Q02950	344 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	MYO5	Q04439	1219 aa	Known RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	COX20	Q04935	205 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	RTT103	Q05543	409 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	SYO1	Q07395	620 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	ACK1	Q07622	623 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	PAM18	Q07914	168 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	YPL216W	Q08964	1102 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
CDC6	YJL194W	ATG31	Q12421	196 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	YPR1	Q12458	312 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	BRR1	Q99177	341 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	AI5_ALPHA	Q9ZZX1	630 aa		4.15	□□□□□ -1.75
CDC6	YJL194W	PDR5	P33302	1511 aa	Known RBP	4.15	□□□□□ -1.75
CDC6	YJL194W	RAV1	P47104	1357 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	TDH2	P00358	332 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
CDC6	YJL194W	HIS5	P07172	385 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	RPL27A	P0C2H6	136 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	RPL27B	P0C2H7	136 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	PRP4	P20053	465 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	ZRC1	P20107	442 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	CMK2	P22517	447 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	RPL24B	P24000	155 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	PBN1	P25580	416 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	CDC20	P26309	610 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	KRE2	P27809	442 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	CIN8	P27895	1000 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
CDC6	YJL194W	BCS1	P32839	456 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	PTR2	P32901	601 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	MRPL10	P36520	322 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	DUG2	P38149	878 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	EGD2	P38879	174 aa	Known RBP	4.14	□□□□□ -1.75
CDC6	YJL194W	DSN1	P40568	576 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	CHA4	P43634	648 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	MRX5	P47007	382 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	SPT20	P50875	604 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	MTL1	P53214	551 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	YGR067C	P53243	804 aa		4.14	□□□□□ -1.75
CDC6	YJL194W	CUS2	P53830	285 aa	Predicted RBP	4.14	□□□□□ -1.75

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