RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeast

Gene RPB4, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB4	YJL140W	PTI1	P39927	425 aa	Predicted RBP	4.97	□□□□□ -1.61
RPB4	YJL140W	GET2	P40056	285 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	BUD13	P46947	266 aa	Predicted RBP	4.97	□□□□□ -1.61
RPB4	YJL140W	YJR154W	P47181	346 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	COG1	P53079	417 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	NOP15	P53927	220 aa	Predicted RBP	4.97	□□□□□ -1.61
RPB4	YJL140W	YNL058C	P53947	316 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	EFM6	P53970	246 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	RMI1	Q02685	241 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	RSM10	Q03201	203 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	COQ11	Q05892	277 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	SEC10	Q06245	871 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	ATG33	Q06485	197 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	VPS68	Q12016	184 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	MDY2	Q12285	212 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	GCN1	P33892	2672 aa	Known RBP	4.97	□□□□□ -1.61
RPB4	YJL140W	HFA1	P32874	2273 aa		4.97	□□□□□ -1.61
RPB4	YJL140W	UBR1	P19812	1950 aa		4.96	□□□□□ -1.61
RPB4	YJL140W	TRX2	P22803	104 aa	Known RBP	4.96	□□□□□ -1.62
RPB4	YJL140W	YCR090C	P25654	182 aa	Known RBP	4.96	□□□□□ -1.62
RPB4	YJL140W	PCL2	P25693	308 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	PTM1	P32857	523 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	PTH2	P34222	208 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	TOM20	P35180	183 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	BZZ1	P38822	633 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
RPB4	YJL140W	YAL037W	P39728	267 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	HAT2	P39984	401 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	RGI2	P40188	164 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	SEC28	P40509	296 aa	Known RBP	4.96	□□□□□ -1.62
RPB4	YJL140W	ZIM17	P42844	174 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	NOP9	P47077	666 aa	Known RBP	4.96	□□□□□ -1.62
RPB4	YJL140W	UBC9	P50623	157 aa	Predicted RBP	4.96	□□□□□ -1.62
RPB4	YJL140W	BOL2	P53082	120 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	LSM3	P57743	89 aa	Known RBP	4.96	□□□□□ -1.62
RPB4	YJL140W	GOT1	Q03554	138 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	EMI1	Q04406	187 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	YDR109C	Q04585	715 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	CIA1	Q05583	330 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	GLO2	Q05584	274 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	RIF2	Q06208	395 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	ARO10	Q06408	635 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	MCP2	Q06567	569 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	PLB3	Q08108	686 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	YPR202W	Q08993	238 aa		4.96	□□□□□ -1.62
RPB4	YJL140W	RPL24A	P04449	155 aa	Known RBP	4.95	□□□□□ -1.62
RPB4	YJL140W	NMT1	P14743	455 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	SCL1	P21243	252 aa	Known RBP	4.95	□□□□□ -1.62
RPB4	YJL140W	EPT1	P22140	391 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	SAN1	P22470	610 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	PRP28	P23394	588 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	PTP1	P25044	335 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	PIM1	P36775	1133 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	MAK5	P38112	773 aa	Predicted RBP	4.95	□□□□□ -1.62
RPB4	YJL140W	LDB7	P38210	180 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	IML3	P38265	245 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	TSC10	P38342	320 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	TIM17	P39515	158 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	FRT2	P39734	528 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	RPH1	P39956	796 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	YEL020C	P39994	560 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	ALG5	P40350	334 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	ALG8	P40351	577 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	COA1	P40452	197 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	HPM1	P40481	377 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	ILM1	P47155	203 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	YJR142W	P47173	342 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	TIS11	P47977	285 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	IMO32	P53219	342 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	COX18	P53239	316 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	FRE4	P53746	719 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	CUS2	P53830	285 aa	Predicted RBP	4.95	□□□□□ -1.62
RPB4	YJL140W	REX2	P54964	269 aa	Known RBP	4.95	□□□□□ -1.62
RPB4	YJL140W	SPP2	Q02521	185 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	ACL4	Q03771	387 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	ARX1	Q03862	593 aa	Known RBP	4.95	□□□□□ -1.62
RPB4	YJL140W	STP3	Q05937	343 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	BLS1	Q06071	122 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	DIC1	Q06143	298 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	YEH2	Q07950	538 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	BSC6	Q08280	497 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	ESA1	Q08649	445 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	MLH3	Q12083	715 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	YDR262W	Q12331	272 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	ICT1	Q12385	394 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	YNL162W-A	Q3E7A8	72 aa		4.95	□□□□□ -1.62
RPB4	YJL140W	CPA1	P07258	411 aa	Known RBP	4.94	□□□□□ -1.62
RPB4	YJL140W	APA1	P16550	321 aa	Known RBP	4.94	□□□□□ -1.62
RPB4	YJL140W	RFA2	P26754	273 aa	Known RBP	4.94	□□□□□ -1.62
RPB4	YJL140W	SPS19	P32573	292 aa	Known RBP	4.94	□□□□□ -1.62
RPB4	YJL140W	SKT5	P34226	696 aa		4.94	□□□□□ -1.62
RPB4	YJL140W	YBL029W	P38201	376 aa		4.94	□□□□□ -1.62
RPB4	YJL140W	DED81	P38707	554 aa	Known RBP	4.94	□□□□□ -1.62
RPB4	YJL140W	EFM1	P38732	585 aa		4.94	□□□□□ -1.62
RPB4	YJL140W	SSZ1	P38788	538 aa	Known RBP	4.94	□□□□□ -1.62
RPB4	YJL140W	CYC2	P38909	366 aa		4.94	□□□□□ -1.62
RPB4	YJL140W	YHB1	P39676	399 aa	Known RBP	4.94	□□□□□ -1.62
RPB4	YJL140W	MAM33	P40513	266 aa		4.94	□□□□□ -1.62
RPB4	YJL140W	CFD1	P40558	293 aa		4.94	□□□□□ -1.62
RPB4	YJL140W	YRB1	P41920	201 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms