RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W DIC1Q06143 298 aa2.11□□□□□ -2.07
MSL1YIR009W SPH1Q06160 661 aa2.11□□□□□ -2.07
MSL1YIR009W SSK1Q07084 712 aa2.11□□□□□ -2.07
MSL1YIR009W UAF30Q08747 228 aa2.11□□□□□ -2.07
MSL1YIR009W REX3Q12090 404 aa2.11□□□□□ -2.07
MSL1YIR009W NCE102Q12207 173 aaRIP-Chip data2.11□□□□□ -2.07not detected
MSL1YIR009W NTE1Q04958 1679 aa2.1□□□□□ -2.07
MSL1YIR009W RHO2P06781 192 aa2.1□□□□□ -2.07
MSL1YIR009W PEP5P12868 1029 aa2.1□□□□□ -2.07
MSL1YIR009W VMA2P16140 517 aaKnown RBP2.1□□□□□ -2.07
MSL1YIR009W SEC62P21825 274 aa2.1□□□□□ -2.07
MSL1YIR009W SNT1P25357 1226 aa2.1□□□□□ -2.07
MSL1YIR009W RHB1P25378 209 aa2.1□□□□□ -2.07
MSL1YIR009W GYP6P32806 458 aa2.1□□□□□ -2.07
MSL1YIR009W PTR2P32901 601 aa2.1□□□□□ -2.07
MSL1YIR009W VPS17P32913 551 aa2.1□□□□□ -2.07
MSL1YIR009W MSN2P33748 704 aa2.1□□□□□ -2.07
MSL1YIR009W CBP4P37267 147 aa2.1□□□□□ -2.07
MSL1YIR009W ZTA1P38230 334 aaKnown RBP2.1□□□□□ -2.07
MSL1YIR009W YBP1P38315 674 aa2.1□□□□□ -2.07
MSL1YIR009W YIL089WP40500 205 aa2.1□□□□□ -2.07
MSL1YIR009W SYG1P40528 902 aa2.1□□□□□ -2.07
MSL1YIR009W IDP2P41939 412 aa2.1□□□□□ -2.07
MSL1YIR009W MPP10P47083 593 aaKnown RBP2.1□□□□□ -2.07
MSL1YIR009W GPI8P49018 411 aa2.1□□□□□ -2.07
MSL1YIR009W PYK2P52489 506 aaKnown RBP2.1□□□□□ -2.07
MSL1YIR009W ALT2P52892 507 aa2.1□□□□□ -2.07
MSL1YIR009W YGL082WP53155 381 aa2.1□□□□□ -2.07
MSL1YIR009W PIB2P53191 635 aa2.1□□□□□ -2.07
MSL1YIR009W YIF1P53845 314 aaKnown RBP2.1□□□□□ -2.07
MSL1YIR009W NCS2P53923 493 aaPredicted RBP2.1□□□□□ -2.07
MSL1YIR009W ETT1Q08421 412 aaKnown RBP2.1□□□□□ -2.07
MSL1YIR009W AYT1Q12226 474 aa2.1□□□□□ -2.07
MSL1YIR009W SPT6P23615 1451 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W CAR1P00812 333 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W PMR1P13586 950 aa2.09□□□□□ -2.07
MSL1YIR009W ARO3P14843 370 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W DAP2P18962 818 aa2.09□□□□□ -2.07
MSL1YIR009W SGV1P23293 657 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W FUN19P28003 413 aaPredicted RBP2.09□□□□□ -2.07
MSL1YIR009W RRP1P35178 278 aaPredicted RBP2.09□□□□□ -2.07
MSL1YIR009W YNK1P36010 153 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W MTC4P38335 694 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W LAG1P38703 411 aa2.09□□□□□ -2.07
MSL1YIR009W RRP4P38792 359 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W YHR210CP38893 341 aa2.09□□□□□ -2.07
MSL1YIR009W VHS2P40463 436 aa2.09□□□□□ -2.07
MSL1YIR009W YIP5P53108 310 aa2.09□□□□□ -2.07
MSL1YIR009W ROG1P53118 685 aa2.09□□□□□ -2.07
MSL1YIR009W CUE3P53137 624 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W DRN1P53255 507 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W RPT4P53549 437 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W YNR068CP53754 272 aa2.09□□□□□ -2.07
MSL1YIR009W AQR1P53943 586 aa2.09□□□□□ -2.07
MSL1YIR009W YDR387CQ04162 555 aa2.09□□□□□ -2.07
MSL1YIR009W VTI1Q04338 217 aa2.09□□□□□ -2.07
MSL1YIR009W DBP9Q06218 594 aaKnown RBP2.09□□□□□ -2.07
MSL1YIR009W PSY3Q12318 242 aa2.09□□□□□ -2.07
MSL1YIR009W SKS1Q12505 502 aa2.09□□□□□ -2.07
MSL1YIR009W TFB5Q3E7C1 72 aaPredicted RBP2.09□□□□□ -2.07
MSL1YIR009W MTR10Q99189 972 aa2.09□□□□□ -2.07
MSL1YIR009W HEM2P05373 342 aa2.08□□□□□ -2.08
MSL1YIR009W GPH1P06738 902 aaKnown RBP2.08□□□□□ -2.08
MSL1YIR009W RPL20AP0CX23 172 aaKnown RBP2.08□□□□□ -2.08
MSL1YIR009W RPL20BP0CX24 172 aaPredicted RBP2.08□□□□□ -2.08
MSL1YIR009W RPI1P23250 407 aaKnown RBP2.08□□□□□ -2.08
MSL1YIR009W ATP11P32453 318 aa2.08□□□□□ -2.08
MSL1YIR009W ASC1P38011 319 aaKnown RBP2.08□□□□□ -2.08
MSL1YIR009W DUG2P38149 878 aa2.08□□□□□ -2.08
MSL1YIR009W MNL1P38888 796 aa2.08□□□□□ -2.08
MSL1YIR009W OSW5P40219 148 aa2.08□□□□□ -2.08
MSL1YIR009W ECM27P47144 725 aa2.08□□□□□ -2.08
MSL1YIR009W MLC1P53141 149 aa2.08□□□□□ -2.08
MSL1YIR009W SLG1P54867 378 aa2.08□□□□□ -2.08
MSL1YIR009W PHO92Q06390 306 aa2.08□□□□□ -2.08
MSL1YIR009W YOR365CQ08844 703 aa2.08□□□□□ -2.08
MSL1YIR009W MED2Q12124 431 aa2.08□□□□□ -2.08
MSL1YIR009W HSP42Q12329 375 aa2.08□□□□□ -2.08
MSL1YIR009W RIP1P08067 215 aa2.07□□□□□ -2.08
MSL1YIR009W PHO91P27514 894 aa2.07□□□□□ -2.08
MSL1YIR009W APE2P32454 952 aaKnown RBP2.07□□□□□ -2.08
MSL1YIR009W REC114P32841 428 aa2.07□□□□□ -2.08
MSL1YIR009W SOR1P35497 357 aaKnown RBP2.07□□□□□ -2.08
MSL1YIR009W UIP5P36137 443 aa2.07□□□□□ -2.08
MSL1YIR009W PIM1P36775 1133 aa2.07□□□□□ -2.08
MSL1YIR009W RRN10P38204 145 aa2.07□□□□□ -2.08
MSL1YIR009W PCF11P39081 626 aaPredicted RBP2.07□□□□□ -2.08
MSL1YIR009W VPS52P39904 641 aa2.07□□□□□ -2.08
MSL1YIR009W YMR147WP40218 223 aaKnown RBP2.07□□□□□ -2.08
MSL1YIR009W PRE5P40302 234 aaKnown RBP2.07□□□□□ -2.08
MSL1YIR009W CSM2P40465 213 aa2.07□□□□□ -2.08
MSL1YIR009W PHB2P50085 310 aa2.07□□□□□ -2.08
MSL1YIR009W RRP46P53256 223 aaPredicted RBP2.07□□□□□ -2.08
MSL1YIR009W PCP1P53259 346 aa2.07□□□□□ -2.08
MSL1YIR009W DSL1P53847 754 aa2.07□□□□□ -2.08
MSL1YIR009W RHO4Q00246 291 aa2.07□□□□□ -2.08
MSL1YIR009W RPN9Q04062 393 aaKnown RBP2.07□□□□□ -2.08
MSL1YIR009W HSP31Q04432 237 aa2.07□□□□□ -2.08
MSL1YIR009W IVY1Q04934 453 aa2.07□□□□□ -2.08
MSL1YIR009W GLO2Q05584 274 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 113.1 ms