RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
TRA1YHR099W CDC6P09119 513 aa2.37□□□□□ -2.03
TRA1YHR099W MRPL8P22353 238 aa2.37□□□□□ -2.03
TRA1YHR099W RNA15P25299 296 aaPredicted RBP2.37□□□□□ -2.03
TRA1YHR099W DMC1P25453 334 aa2.37□□□□□ -2.03
TRA1YHR099W GUT1P32190 709 aa2.37□□□□□ -2.03
TRA1YHR099W PHO11P35842 467 aa2.37□□□□□ -2.03
TRA1YHR099W AIM10P39965 576 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W SMB1P40018 196 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W SLS1P42900 643 aa2.37□□□□□ -2.03
TRA1YHR099W AIM11P87275 137 aa2.37□□□□□ -2.03
TRA1YHR099W YSA1Q01976 231 aa2.37□□□□□ -2.03
TRA1YHR099W YDC1Q02896 317 aa2.37□□□□□ -2.03
TRA1YHR099W FDC1Q03034 503 aa2.37□□□□□ -2.03
TRA1YHR099W MZM1Q03429 123 aaPredicted RBP2.37□□□□□ -2.03
TRA1YHR099W GPM3Q12326 303 aa2.37□□□□□ -2.03
TRA1YHR099W CMP2P14747 604 aa2.37□□□□□ -2.03
TRA1YHR099W SFL1P20134 766 aa2.37□□□□□ -2.03
TRA1YHR099W UBC1P21734 215 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W GUA1P38625 525 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W YHL049CP38722 271 aa2.37□□□□□ -2.03
TRA1YHR099W CTF8P38877 133 aa2.37□□□□□ -2.03
TRA1YHR099W AIR1P40507 360 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W ASK10P48361 1146 aa2.37□□□□□ -2.03
TRA1YHR099W SAY1P53324 424 aa2.37□□□□□ -2.03
TRA1YHR099W YTP1P53584 459 aa2.37□□□□□ -2.03
TRA1YHR099W DCP1Q12517 231 aaPredicted RBP2.37□□□□□ -2.03
TRA1YHR099W RAS1P01119 309 aa2.37□□□□□ -2.03
TRA1YHR099W LRE1P25579 583 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W STP22P25604 385 aa2.37□□□□□ -2.03
TRA1YHR099W DPH5P32469 300 aaPredicted RBP2.37□□□□□ -2.03
TRA1YHR099W TMT1P32643 299 aa2.37□□□□□ -2.03
TRA1YHR099W CST26P38226 397 aa2.37□□□□□ -2.03
TRA1YHR099W DSS1P39112 969 aa2.37□□□□□ -2.03
TRA1YHR099W YJL055WP47044 245 aa2.37□□□□□ -2.03
TRA1YHR099W CPR7P47103 393 aa2.37□□□□□ -2.03
TRA1YHR099W VPS25P47142 202 aa2.37□□□□□ -2.03
TRA1YHR099W MDM34P53083 459 aa2.37□□□□□ -2.03
TRA1YHR099W ARX1Q03862 593 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W PHM7Q12252 991 aa2.37□□□□□ -2.03
TRA1YHR099W SAL1D6W196 494 aa2.37□□□□□ -2.03
TRA1YHR099W IPP1P00817 287 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W GCR1P07261 785 aa2.37□□□□□ -2.03
TRA1YHR099W BCY1P07278 416 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W SNA3P14359 133 aa2.37□□□□□ -2.03
TRA1YHR099W RPB3P16370 318 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W SPO7P18410 259 aa2.37□□□□□ -2.03
TRA1YHR099W AEP2P22136 580 aa2.37□□□□□ -2.03
TRA1YHR099W PRO3P32263 286 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W HYM1P32464 399 aa2.37□□□□□ -2.03
TRA1YHR099W RPA43P46669 326 aa2.37□□□□□ -2.03
TRA1YHR099W YGL114WP53134 725 aa2.37□□□□□ -2.03
TRA1YHR099W YDR286CQ05530 114 aa2.37□□□□□ -2.03
TRA1YHR099W SPC3Q12133 184 aa2.37□□□□□ -2.03
TRA1YHR099W PSF1Q12488 208 aa2.37□□□□□ -2.03
TRA1YHR099W COX6P00427 148 aa2.37□□□□□ -2.03
TRA1YHR099W TEF1P02994 458 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W COX4P04037 155 aa2.37□□□□□ -2.03
TRA1YHR099W MSF1P08425 469 aa2.37□□□□□ -2.03
TRA1YHR099W MER1P16523 270 aa2.37□□□□□ -2.03
TRA1YHR099W YCP4P25349 247 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W MAL32P38158 584 aa2.37□□□□□ -2.03
TRA1YHR099W APD1P38281 316 aa2.37□□□□□ -2.03
TRA1YHR099W POP4P38336 279 aa2.37□□□□□ -2.03
TRA1YHR099W MTG2P38860 518 aa2.37□□□□□ -2.03
TRA1YHR099W DRN1P53255 507 aaKnown RBP2.37□□□□□ -2.03
TRA1YHR099W MAL12P53341 584 aa2.37□□□□□ -2.03
TRA1YHR099W MSC2Q03455 724 aa2.37□□□□□ -2.03
TRA1YHR099W MSS11Q03825 758 aa2.37□□□□□ -2.03
TRA1YHR099W TAZ1Q06510 381 aa2.37□□□□□ -2.03
TRA1YHR099W YLR108CQ12259 485 aa2.37□□□□□ -2.03
TRA1YHR099W ARP6Q12509 438 aa2.37□□□□□ -2.03
TRA1YHR099W GPA2P10823 449 aa2.37□□□□□ -2.03
TRA1YHR099W OCT1P35999 772 aa2.37□□□□□ -2.03
TRA1YHR099W MRPL4P36517 319 aa2.37□□□□□ -2.03
TRA1YHR099W FTH1P38310 465 aa2.37□□□□□ -2.03
TRA1YHR099W TAF4P50105 388 aa2.37□□□□□ -2.03
TRA1YHR099W UFD1P53044 361 aa2.37□□□□□ -2.03
TRA1YHR099W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
TRA1YHR099W YPR172WQ06608 200 aa2.37□□□□□ -2.03
TRA1YHR099W MMT2Q08970 484 aa2.37□□□□□ -2.03
TRA1YHR099W SST2P11972 698 aaKnown RBP2.36□□□□□ -2.03
TRA1YHR099W RNR1P21524 888 aaKnown RBP2.36□□□□□ -2.03
TRA1YHR099W MVD1P32377 396 aaKnown RBP2.36□□□□□ -2.03
TRA1YHR099W AFR1P33304 620 aa2.36□□□□□ -2.03
TRA1YHR099W GPI16P38875 610 aa2.36□□□□□ -2.03
TRA1YHR099W ROG1P53118 685 aa2.36□□□□□ -2.03
TRA1YHR099W YNR029CP53729 429 aaKnown RBP2.36□□□□□ -2.03
TRA1YHR099W APJ1P53940 528 aa2.36□□□□□ -2.03
TRA1YHR099W CNL1Q06333 122 aa2.36□□□□□ -2.03
TRA1YHR099W PER33Q12144 273 aa2.36□□□□□ -2.03
TRA1YHR099W ILV2P07342 687 aaKnown RBP2.36□□□□□ -2.03
TRA1YHR099W URA7P28274 579 aaKnown RBP2.36□□□□□ -2.03
TRA1YHR099W MTC2P34246 357 aa2.36□□□□□ -2.03
TRA1YHR099W YBR197CP38306 217 aa2.36□□□□□ -2.03
TRA1YHR099W PEX18P38855 283 aa2.36□□□□□ -2.03
TRA1YHR099W VFA1P40080 203 aa2.36□□□□□ -2.03
TRA1YHR099W QRI1P43123 477 aaKnown RBP2.36□□□□□ -2.03
TRA1YHR099W BUL1P48524 976 aa2.36□□□□□ -2.03
TRA1YHR099W SOL1P50278 321 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms