RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeast

Gene SCL1, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCL1	YGL011C	ARO3	P14843	370 aa	Known RBP	4.24	□□□□□ -1.73
SCL1	YGL011C	HEL1	P36113	551 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	NAT2	P37293	288 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	LRP1	P38801	184 aa	Known RBP	4.24	□□□□□ -1.73
SCL1	YGL011C	VHS2	P40463	436 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	OST1	P41543	476 aa	Known RBP	4.24	□□□□□ -1.73
SCL1	YGL011C	LAM5	P43560	674 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	YJL132W	P47014	750 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	PHB2	P50085	310 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	REX4	Q08237	289 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	HNT3	Q08702	217 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	TIM18	Q08749	192 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	MED2	Q12124	431 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	PKH2	Q12236	1081 aa	Known RBP	4.24	□□□□□ -1.73
SCL1	YGL011C	RMD5	Q12508	421 aa		4.24	□□□□□ -1.73
SCL1	YGL011C	LSB5	P25369	354 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	YAL037W	P39728	267 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	YNR048W	P53740	393 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	GOR1	P53839	350 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	GPI15	P53961	229 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	OAZ1	Q02803	292 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	TAF12	Q03761	539 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	SGT1	Q08446	395 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	UAF30	Q08747	228 aa		4.23	□□□□□ -1.73
SCL1	YGL011C	ADE4	P04046	510 aa	Known RBP	4.22	□□□□□ -1.73
SCL1	YGL011C	ARG4	P04076	463 aa	Predicted RBP	4.22	□□□□□ -1.73
SCL1	YGL011C	CDC60	P26637	1090 aa	Known RBP	4.22	□□□□□ -1.73
SCL1	YGL011C	LTV1	P34078	463 aa		4.22	□□□□□ -1.73
SCL1	YGL011C	MIX23	P38162	196 aa		4.22	□□□□□ -1.73
SCL1	YGL011C	ZTA1	P38230	334 aa	Known RBP	4.22	□□□□□ -1.73
SCL1	YGL011C	FAD1	P38913	306 aa		4.22	□□□□□ -1.73
SCL1	YGL011C	YIL067C	P40514	678 aa		4.22	□□□□□ -1.73
SCL1	YGL011C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SCL1	YGL011C	SSN8	P47821	323 aa		4.22	□□□□□ -1.73
SCL1	YGL011C	IMP4	P53941	290 aa	Known RBP	4.22	□□□□□ -1.73
SCL1	YGL011C	AEP3	Q12089	606 aa		4.22	□□□□□ -1.73
SCL1	YGL011C	YLL056C	Q12177	298 aa		4.22	□□□□□ -1.73
SCL1	YGL011C	SNU66	Q12420	587 aa	Predicted RBP	4.22	□□□□□ -1.73
SCL1	YGL011C	RRP12	Q12754	1228 aa	Known RBP	4.22	□□□□□ -1.73
SCL1	YGL011C	RAD61	Q99359	647 aa		4.22	□□□□□ -1.73
SCL1	YGL011C	TEF1	P02994	458 aa	Known RBP	4.21	□□□□□ -1.74
SCL1	YGL011C	PMR1	P13586	950 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	HEM15	P16622	393 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	CPR3	P25719	182 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	RGT1	P32862	1170 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	PEX5	P35056	612 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	ASC1	P38011	319 aa	Known RBP	4.21	□□□□□ -1.74
SCL1	YGL011C	EFM4	P40516	257 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	RSN1	Q03516	953 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	BET5	Q03630	159 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	YLR456W	Q06199	204 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	SKI7	Q08491	747 aa	Predicted RBP	4.21	□□□□□ -1.74
SCL1	YGL011C	DCI1	Q08558	271 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	SPE3	Q12074	293 aa	Known RBP	4.21	□□□□□ -1.74
SCL1	YGL011C	PAR32	Q12515	295 aa	Known RBP	4.21	□□□□□ -1.74
SCL1	YGL011C	YER078W-A	Q3E7A2	54 aa		4.21	□□□□□ -1.74
SCL1	YGL011C	IMA3	P0CW40	589 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	IMA4	P0CW41	589 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	SPO12	P17123	173 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	SLY1	P22213	666 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	MNE1	P24720	663 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	NIP1	P32497	812 aa	Known RBP	4.2	□□□□□ -1.74
SCL1	YGL011C	RIB5	P38145	238 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	YBR137W	P38276	179 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	YBP1	P38315	674 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	CCT4	P39078	528 aa	Known RBP	4.2	□□□□□ -1.74
SCL1	YGL011C	YFL067W	P43537	175 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	YJL055W	P47044	245 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	IBD2	P53892	351 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	SNT309	Q06091	175 aa	Predicted RBP	4.2	□□□□□ -1.74
SCL1	YGL011C	IMA2	Q08295	589 aa		4.2	□□□□□ -1.74
SCL1	YGL011C	SWH1	P35845	1188 aa		4.19	□□□□□ -1.74
SCL1	YGL011C	FAA2	P39518	744 aa		4.19	□□□□□ -1.74
SCL1	YGL011C	BOR1	P53838	576 aa		4.19	□□□□□ -1.74
SCL1	YGL011C	HXT11	P54862	567 aa		4.19	□□□□□ -1.74
SCL1	YGL011C	RPN5	Q12250	445 aa	Known RBP	4.19	□□□□□ -1.74
SCL1	YGL011C	KKQ8	P36004	724 aa		4.18	□□□□□ -1.74
SCL1	YGL011C	PPM1	Q04081	328 aa		4.18	□□□□□ -1.74
SCL1	YGL011C	SXM1	Q04175	944 aa	Known RBP	4.18	□□□□□ -1.74
SCL1	YGL011C	SNX3	Q08826	162 aa	Known RBP	4.18	□□□□□ -1.74
SCL1	YGL011C	SRL2	Q12020	392 aa		4.18	□□□□□ -1.74
SCL1	YGL011C	RAD57	P25301	460 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	CPR4	P25334	318 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	NCA3	P46955	337 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	AZR1	P50080	613 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	VPS9	P54787	451 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	YMR181C	Q03231	154 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	URH1	Q04179	340 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	ESA1	Q08649	445 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	BUG1	Q12191	341 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	ATG34	Q12292	412 aa		4.17	□□□□□ -1.74
SCL1	YGL011C	SPS22	P25380	463 aa		4.16	□□□□□ -1.74
SCL1	YGL011C	RIM1	P32445	135 aa	Known RBP	4.16	□□□□□ -1.74
SCL1	YGL011C	RFS1	P38234	210 aa	Known RBP	4.16	□□□□□ -1.74
SCL1	YGL011C	STP2	P38704	541 aa		4.16	□□□□□ -1.74
SCL1	YGL011C	MTC6	P38849	526 aa		4.16	□□□□□ -1.74
SCL1	YGL011C	GAT2	P40209	560 aa		4.16	□□□□□ -1.74
SCL1	YGL011C	YPS6	P40583	537 aa		4.16	□□□□□ -1.74
SCL1	YGL011C	WWM1	P43582	211 aa	Known RBP	4.16	□□□□□ -1.74
SCL1	YGL011C	RPN9	Q04062	393 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms