RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C GRX8Q05926 109 aa2.08□□□□□ -2.08
PRE4YFR050C BLS1Q06071 122 aa2.08□□□□□ -2.08
PRE4YFR050C GRS2Q06817 618 aa2.08□□□□□ -2.08
PRE4YFR050C POS5Q06892 414 aa2.08□□□□□ -2.08
PRE4YFR050C VAM6Q07468 1049 aa2.08□□□□□ -2.08
PRE4YFR050C MLH2Q07980 695 aa2.08□□□□□ -2.08
PRE4YFR050C SRL1Q08673 210 aa2.08□□□□□ -2.08
PRE4YFR050C CDC15P27636 974 aa2.07□□□□□ -2.08
PRE4YFR050C SOF1P33750 489 aaKnown RBP2.07□□□□□ -2.08
PRE4YFR050C YKL187CP34231 750 aa2.07□□□□□ -2.08
PRE4YFR050C CAB3P36076 571 aa2.07□□□□□ -2.08
PRE4YFR050C UBP13P38187 747 aa2.07□□□□□ -2.08
PRE4YFR050C OM14P38325 134 aa2.07□□□□□ -2.08
PRE4YFR050C ECM14P38836 430 aa2.07□□□□□ -2.08
PRE4YFR050C DHH1P39517 506 aaKnown RBP2.07□□□□□ -2.08
PRE4YFR050C SMK1P41808 388 aa2.07□□□□□ -2.08
PRE4YFR050C PRP24P49960 444 aaKnown RBP2.07□□□□□ -2.08
PRE4YFR050C ARE2P53629 642 aaKnown RBP2.07□□□□□ -2.08
PRE4YFR050C YNL234WP53857 426 aa2.07□□□□□ -2.08
PRE4YFR050C ECI1Q05871 280 aa2.07□□□□□ -2.08
PRE4YFR050C SMD2Q06217 110 aaKnown RBP2.07□□□□□ -2.08
PRE4YFR050C CRN1Q06440 651 aa2.07□□□□□ -2.08
PRE4YFR050C FRE3Q08905 711 aa2.07□□□□□ -2.08
PRE4YFR050C VPS68Q12016 184 aa2.07□□□□□ -2.08
PRE4YFR050C YLR112WQ12130 139 aa2.07□□□□□ -2.08
PRE4YFR050C TY2A-LR1P0C2J4 438 aa2.06□□□□□ -2.08
PRE4YFR050C TY2A-FP0CX61 438 aa2.06□□□□□ -2.08
PRE4YFR050C TY2A-GR2P0CX62 438 aa2.06□□□□□ -2.08
PRE4YFR050C RAP1P11938 827 aa2.06□□□□□ -2.08
PRE4YFR050C PGI1P12709 554 aaKnown RBP2.06□□□□□ -2.08
PRE4YFR050C APA1P16550 321 aaKnown RBP2.06□□□□□ -2.08
PRE4YFR050C NCP1P16603 691 aaKnown RBP2.06□□□□□ -2.08
PRE4YFR050C YSP3P25036 478 aa2.06□□□□□ -2.08
PRE4YFR050C YCR043CP25361 127 aa2.06□□□□□ -2.08
PRE4YFR050C TY2A-CP25383 438 aa2.06□□□□□ -2.08
PRE4YFR050C MNN2P38069 597 aa2.06□□□□□ -2.08
PRE4YFR050C EXO84P38261 753 aa2.06□□□□□ -2.08
PRE4YFR050C UBA4P38820 440 aa2.06□□□□□ -2.08
PRE4YFR050C VPS41P38959 992 aa2.06□□□□□ -2.08
PRE4YFR050C MET30P39014 640 aa2.06□□□□□ -2.08
PRE4YFR050C DSE1P40077 573 aa2.06□□□□□ -2.08
PRE4YFR050C PFK26P40433 827 aaKnown RBP2.06□□□□□ -2.08
PRE4YFR050C YIL152WP40455 235 aa2.06□□□□□ -2.08
PRE4YFR050C IST3P40565 148 aaPredicted RBP2.06□□□□□ -2.08
PRE4YFR050C LCL3P53153 274 aa2.06□□□□□ -2.08
PRE4YFR050C DIG1Q03063 452 aaKnown RBP2.06□□□□□ -2.08
PRE4YFR050C TY2A-DR2Q03483 438 aa2.06□□□□□ -2.08
PRE4YFR050C YLR281CQ05863 155 aa2.06□□□□□ -2.08
PRE4YFR050C UTP21Q06078 939 aaPredicted RBP2.06□□□□□ -2.08
PRE4YFR050C TMA16Q08687 178 aa2.06□□□□□ -2.08
PRE4YFR050C MDM32Q12171 622 aa2.06□□□□□ -2.08
PRE4YFR050C TY2A-BQ12260 438 aa2.06□□□□□ -2.08
PRE4YFR050C TY2A-OR2Q12293 438 aa2.06□□□□□ -2.08
PRE4YFR050C TY2A-DR1Q12392 438 aa2.06□□□□□ -2.08
PRE4YFR050C TY2A-OR1Q12439 438 aa2.06□□□□□ -2.08
PRE4YFR050C ERG27Q12452 347 aaKnown RBP2.06□□□□□ -2.08
PRE4YFR050C TY2A-DR3Q99303 438 aa2.06□□□□□ -2.08
PRE4YFR050C SLH1P53327 1967 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C FOB1O13329 566 aa2.05□□□□□ -2.08
PRE4YFR050C GUK1P15454 187 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C FRS2P15625 503 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C YCK1P23291 538 aa2.05□□□□□ -2.08
PRE4YFR050C CNS1P33313 385 aa2.05□□□□□ -2.08
PRE4YFR050C PTH2P34222 208 aa2.05□□□□□ -2.08
PRE4YFR050C TEF4P36008 412 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C TUL1P36096 758 aa2.05□□□□□ -2.08
PRE4YFR050C NTR2P36118 322 aaPredicted RBP2.05□□□□□ -2.08
PRE4YFR050C RKM3P38222 552 aa2.05□□□□□ -2.08
PRE4YFR050C PCL6P40038 420 aa2.05□□□□□ -2.08
PRE4YFR050C RPT2P40327 437 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C AGE2P40529 298 aa2.05□□□□□ -2.08
PRE4YFR050C CUP9P41817 306 aa2.05□□□□□ -2.08
PRE4YFR050C TES1P41903 349 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C SHE10P53075 577 aa2.05□□□□□ -2.08
PRE4YFR050C ARC35P53731 342 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C YNL181WP53878 407 aa2.05□□□□□ -2.08
PRE4YFR050C EAF7P53911 425 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C BET4Q00618 327 aa2.05□□□□□ -2.08
PRE4YFR050C YMR178WQ03219 274 aaKnown RBP2.05□□□□□ -2.08
PRE4YFR050C CAC2Q04199 468 aa2.05□□□□□ -2.08
PRE4YFR050C SPG3Q04398 127 aaPredicted RBP2.05□□□□□ -2.08
PRE4YFR050C PFK27Q12471 397 aaPredicted RBP2.05□□□□□ -2.08
PRE4YFR050C NCB2Q92317 146 aa2.05□□□□□ -2.08
PRE4YFR050C YLR302CO13544 120 aa2.04□□□□□ -2.08
PRE4YFR050C PET111P08468 800 aa2.04□□□□□ -2.08
PRE4YFR050C YJL197C-AP0C5P0 93 aa2.04□□□□□ -2.08
PRE4YFR050C RPI1P23250 407 aaKnown RBP2.04□□□□□ -2.08
PRE4YFR050C DBF20P32328 564 aa2.04□□□□□ -2.08
PRE4YFR050C SAC1P32368 623 aaKnown RBP2.04□□□□□ -2.08
PRE4YFR050C MRS6P32864 603 aaKnown RBP2.04□□□□□ -2.08
PRE4YFR050C IFA38P38286 347 aa2.04□□□□□ -2.08
PRE4YFR050C MMS21P38632 267 aa2.04□□□□□ -2.08
PRE4YFR050C SEC31P38968 1273 aaKnown RBP2.04□□□□□ -2.08
PRE4YFR050C ECM10P39987 644 aa2.04□□□□□ -2.08
PRE4YFR050C RSM25P40496 264 aa2.04□□□□□ -2.08
PRE4YFR050C SAP185P40856 1058 aa2.04□□□□□ -2.08
PRE4YFR050C CTK2P46962 323 aa2.04□□□□□ -2.08
PRE4YFR050C CUE3P53137 624 aaKnown RBP2.04□□□□□ -2.08
PRE4YFR050C MLC1P53141 149 aa2.04□□□□□ -2.08
PRE4YFR050C BNI5P53890 448 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms