RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	SLF1	Q12034	447 aa	Known RBP	4.01	□□□□□ -1.77
TPA1	YER049W	WTM1	Q12363	437 aa	Known RBP	4.01	□□□□□ -1.77
TPA1	YER049W	ARP7	Q12406	477 aa		4.01	□□□□□ -1.77
TPA1	YER049W	MHF2	Q3E829	80 aa		4.01	□□□□□ -1.77
TPA1	YER049W	MHF1	Q3E835	90 aa		4.01	□□□□□ -1.77
TPA1	YER049W	YBR182C-A	Q8TGU6	64 aa		4.01	□□□□□ -1.77
TPA1	YER049W	AFI1	Q99222	893 aa		4.01	□□□□□ -1.77
TPA1	YER049W	RPS9A	O13516	197 aa	Known RBP	4	□□□□□ -1.77
TPA1	YER049W	HXK2	P04807	486 aa	Known RBP	4	□□□□□ -1.77
TPA1	YER049W	PUT2	P07275	575 aa		4	□□□□□ -1.77
TPA1	YER049W	ENA1	P13587	1091 aa		4	□□□□□ -1.77
TPA1	YER049W	CMP2	P14747	604 aa		4	□□□□□ -1.77
TPA1	YER049W	PHO3	P24031	467 aa		4	□□□□□ -1.77
TPA1	YER049W	GIT1	P25346	518 aa		4	□□□□□ -1.77
TPA1	YER049W	OCA4	P25366	362 aa		4	□□□□□ -1.77
TPA1	YER049W	RSA4	P25382	515 aa	Known RBP	4	□□□□□ -1.77
TPA1	YER049W	NTG1	P31378	399 aa		4	□□□□□ -1.77
TPA1	YER049W	TKL2	P33315	681 aa		4	□□□□□ -1.77
TPA1	YER049W	IST3	P40565	148 aa	Predicted RBP	4	□□□□□ -1.77
TPA1	YER049W	OPT1	P40897	799 aa		4	□□□□□ -1.77
TPA1	YER049W	FAR7	P43592	221 aa		4	□□□□□ -1.77
TPA1	YER049W	YJR096W	P47137	282 aa		4	□□□□□ -1.77
TPA1	YER049W	MSE1	P48525	536 aa		4	□□□□□ -1.77
TPA1	YER049W	CWC23	P52868	283 aa	Predicted RBP	4	□□□□□ -1.77
TPA1	YER049W	YGR012W	P53206	393 aa		4	□□□□□ -1.77
TPA1	YER049W	ESF2	P53743	316 aa	Known RBP	4	□□□□□ -1.77
TPA1	YER049W	ENA2	Q01896	1091 aa		4	□□□□□ -1.77
TPA1	YER049W	YKR011C	Q02209	353 aa		4	□□□□□ -1.77
TPA1	YER049W	SMA1	Q02651	245 aa		4	□□□□□ -1.77
TPA1	YER049W	MUK1	Q02866	612 aa		4	□□□□□ -1.77
TPA1	YER049W	ABZ2	Q03266	374 aa		4	□□□□□ -1.77
TPA1	YER049W	EFR3	Q03653	782 aa	Known RBP	4	□□□□□ -1.77
TPA1	YER049W	YML108W	Q03759	105 aa		4	□□□□□ -1.77
TPA1	YER049W	TAF12	Q03761	539 aa		4	□□□□□ -1.77
TPA1	YER049W	SPG3	Q04398	127 aa	Predicted RBP	4	□□□□□ -1.77
TPA1	YER049W	COA4	Q05809	96 aa		4	□□□□□ -1.77
TPA1	YER049W	MFG1	Q07684	458 aa		4	□□□□□ -1.77
TPA1	YER049W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
TPA1	YER049W	PGC1	Q08959	321 aa		4	□□□□□ -1.77
TPA1	YER049W	LCB4	Q12246	624 aa		4	□□□□□ -1.77
TPA1	YER049W	BBP1	Q12365	385 aa		4	□□□□□ -1.77
TPA1	YER049W	ICT1	Q12385	394 aa		4	□□□□□ -1.77
TPA1	YER049W	ENA5	Q12691	1091 aa		4	□□□□□ -1.77
TPA1	YER049W	HTZ1	Q12692	134 aa	Known RBP	4	□□□□□ -1.77
TPA1	YER049W	CYC1	P00044	109 aa	Predicted RBP	3.99	□□□□□ -1.77
TPA1	YER049W	ARG81	P05085	880 aa		3.99	□□□□□ -1.77
TPA1	YER049W	RPL6B	P05739	176 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	AMD1	P15274	810 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	HSP30	P25619	332 aa		3.99	□□□□□ -1.77
TPA1	YER049W	YCR099C	P25657	155 aa		3.99	□□□□□ -1.77
TPA1	YER049W	STB6	P36085	766 aa		3.99	□□□□□ -1.77
TPA1	YER049W	ARN2	P38724	620 aa		3.99	□□□□□ -1.77
TPA1	YER049W	YHL041W	P38730	149 aa		3.99	□□□□□ -1.77
TPA1	YER049W	ZRG8	P40021	1076 aa		3.99	□□□□□ -1.77
TPA1	YER049W	RGI1	P40043	161 aa	Predicted RBP	3.99	□□□□□ -1.77
TPA1	YER049W	DDI1	P40087	428 aa		3.99	□□□□□ -1.77
TPA1	YER049W	GAB1	P41733	394 aa		3.99	□□□□□ -1.77
TPA1	YER049W	IRC6	P43615	237 aa		3.99	□□□□□ -1.77
TPA1	YER049W	BUD13	P46947	266 aa	Predicted RBP	3.99	□□□□□ -1.77
TPA1	YER049W	GPI8	P49018	411 aa		3.99	□□□□□ -1.77
TPA1	YER049W	SHY1	P53266	389 aa		3.99	□□□□□ -1.77
TPA1	YER049W	EFM6	P53970	246 aa		3.99	□□□□□ -1.77
TPA1	YER049W	MUS81	Q04149	632 aa	Predicted RBP	3.99	□□□□□ -1.77
TPA1	YER049W	SSL1	Q04673	461 aa	Predicted RBP	3.99	□□□□□ -1.77
TPA1	YER049W	RNH1	Q04740	348 aa		3.99	□□□□□ -1.77
TPA1	YER049W	YHC1	Q05900	231 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	YPS7	Q06325	596 aa		3.99	□□□□□ -1.77
TPA1	YER049W	LDB18	Q07887	179 aa		3.99	□□□□□ -1.77
TPA1	YER049W	THP1	Q08231	455 aa		3.99	□□□□□ -1.77
TPA1	YER049W	MED7	Q08278	222 aa		3.99	□□□□□ -1.77
TPA1	YER049W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
TPA1	YER049W	GUP2	Q08929	609 aa		3.99	□□□□□ -1.77
TPA1	YER049W	YPL191C	Q08930	360 aa		3.99	□□□□□ -1.77
TPA1	YER049W	THP3	Q12049	470 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	MLH3	Q12083	715 aa		3.99	□□□□□ -1.77
TPA1	YER049W	YDL177C	Q12257	170 aa		3.99	□□□□□ -1.77
TPA1	YER049W	PST2	Q12335	198 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	YLR149C	Q99296	730 aa		3.99	□□□□□ -1.77
TPA1	YER049W	PRC1	P00729	532 aa		3.99	□□□□□ -1.77
TPA1	YER049W	ATP1	P07251	545 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	GUK1	P15454	187 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	DAP2	P18962	818 aa		3.99	□□□□□ -1.77
TPA1	YER049W	VPS33	P20795	691 aa		3.99	□□□□□ -1.77
TPA1	YER049W	RHB1	P25378	209 aa		3.99	□□□□□ -1.77
TPA1	YER049W	MF(ALPHA)2	P32435	120 aa		3.99	□□□□□ -1.77
TPA1	YER049W	CDC5	P32562	705 aa		3.99	□□□□□ -1.77
TPA1	YER049W	DSS4	P32601	143 aa		3.99	□□□□□ -1.77
TPA1	YER049W	HCS1	P34243	683 aa		3.99	□□□□□ -1.77
TPA1	YER049W	LRG1	P35688	1017 aa		3.99	□□□□□ -1.77
TPA1	YER049W	MAK5	P38112	773 aa	Predicted RBP	3.99	□□□□□ -1.77
TPA1	YER049W	POL12	P38121	705 aa	Predicted RBP	3.99	□□□□□ -1.77
TPA1	YER049W	SLX1	P38324	304 aa		3.99	□□□□□ -1.77
TPA1	YER049W	ARP1	P38696	384 aa		3.99	□□□□□ -1.77
TPA1	YER049W	AIM23	P47015	356 aa		3.99	□□□□□ -1.77
TPA1	YER049W	GTO1	P48239	356 aa		3.99	□□□□□ -1.77
TPA1	YER049W	SAP4	P53036	818 aa		3.99	□□□□□ -1.77
TPA1	YER049W	LSG1	P53145	640 aa	Known RBP	3.99	□□□□□ -1.77
TPA1	YER049W	TIM13	P53299	105 aa		3.99	□□□□□ -1.77
TPA1	YER049W	CPR8	P53728	308 aa		3.99	□□□□□ -1.77
TPA1	YER049W	YNL134C	P53912	376 aa	Known RBP	3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 106.3 ms