RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C RPP1BP10622 106 aaKnown RBP10.28□□□□□ -0.76
SPC25YER018C CTS1P29029 562 aa10.28□□□□□ -0.76
SPC25YER018C SRB5P32585 307 aa10.28□□□□□ -0.76
SPC25YER018C SUI1P32911 108 aaKnown RBP10.28□□□□□ -0.76
SPC25YER018C AST1P35183 429 aa10.28□□□□□ -0.76
SPC25YER018C OAR1P35731 278 aa10.28□□□□□ -0.76
SPC25YER018C OMA1P36163 345 aa10.28□□□□□ -0.76
SPC25YER018C DLD3P39976 496 aaKnown RBP10.28□□□□□ -0.76
SPC25YER018C CFD1P40558 293 aa10.28□□□□□ -0.76
SPC25YER018C YJL043WP47053 257 aa10.28□□□□□ -0.76
SPC25YER018C IBA57P47158 497 aa10.28□□□□□ -0.76
SPC25YER018C YNL095CP53932 642 aa10.28□□□□□ -0.76
SPC25YER018C HOT1Q03213 719 aa10.28□□□□□ -0.76
SPC25YER018C RRN11Q04712 507 aa10.28□□□□□ -0.76
SPC25YER018C GPI11Q06636 219 aa10.28□□□□□ -0.76
SPC25YER018C PSY3Q12318 242 aa10.28□□□□□ -0.76
SPC25YER018C CBP2P03874 630 aaPredicted RBP10.27□□□□□ -0.77
SPC25YER018C COR1P07256 457 aa10.27□□□□□ -0.77
SPC25YER018C CBS2P14905 389 aa10.27□□□□□ -0.77
SPC25YER018C CMK2P22517 447 aa10.27□□□□□ -0.77
SPC25YER018C CDC3P32457 520 aaKnown RBP10.27□□□□□ -0.77
SPC25YER018C STP2P38704 541 aa10.27□□□□□ -0.77
SPC25YER018C AIM2P39721 246 aa10.27□□□□□ -0.77
SPC25YER018C RIM21P48565 533 aa10.27□□□□□ -0.77
SPC25YER018C TOM22P49334 152 aa10.27□□□□□ -0.77
SPC25YER018C SED5Q01590 340 aa10.27□□□□□ -0.77
SPC25YER018C YLR456WQ06199 204 aa10.27□□□□□ -0.77
SPC25YER018C POL2P21951 2222 aaKnown RBP10.27□□□□□ -0.77
SPC25YER018C HTA1P04911 132 aaKnown RBP10.26□□□□□ -0.77
SPC25YER018C RAD7P06779 565 aa10.26□□□□□ -0.77
SPC25YER018C NPR1P22211 790 aa10.26□□□□□ -0.77
SPC25YER018C SPB1P25582 841 aaPredicted RBP10.26□□□□□ -0.77
SPC25YER018C ARP2P32381 391 aaKnown RBP10.26□□□□□ -0.77
SPC25YER018C CDC12P32468 407 aaKnown RBP10.26□□□□□ -0.77
SPC25YER018C SWH1P35845 1188 aa10.26□□□□□ -0.77
SPC25YER018C RBG1P39729 369 aa10.26□□□□□ -0.77
SPC25YER018C RIC1P40395 1056 aa10.26□□□□□ -0.77
SPC25YER018C PSA1P41940 361 aaKnown RBP10.26□□□□□ -0.77
SPC25YER018C ALK1P43633 760 aaKnown RBP10.26□□□□□ -0.77
SPC25YER018C YJR142WP47173 342 aa10.26□□□□□ -0.77
SPC25YER018C YNR068CP53754 272 aa10.26□□□□□ -0.77
SPC25YER018C YKU80Q04437 629 aa10.26□□□□□ -0.77
SPC25YER018C RQC1Q05468 723 aaKnown RBP10.26□□□□□ -0.77
SPC25YER018C DIC1Q06143 298 aa10.26□□□□□ -0.77
SPC25YER018C ARR1Q06596 294 aa10.26□□□□□ -0.77
SPC25YER018C TEN1Q07921 160 aa10.26□□□□□ -0.77
SPC25YER018C NSI1Q12457 570 aa10.26□□□□□ -0.77
SPC25YER018C SKM1Q12469 655 aa10.26□□□□□ -0.77
SPC25YER018C PFK27Q12471 397 aaPredicted RBP10.26□□□□□ -0.77
SPC25YER018C MHF2Q3E829 80 aa10.26□□□□□ -0.77
SPC25YER018C SLH1P53327 1967 aaKnown RBP10.25□□□□□ -0.77
SPC25YER018C VPS33P20795 691 aa10.25□□□□□ -0.77
SPC25YER018C TAH1P25638 111 aaPredicted RBP10.25□□□□□ -0.77
SPC25YER018C NTG1P31378 399 aa10.25□□□□□ -0.77
SPC25YER018C NTH1P32356 751 aa10.25□□□□□ -0.77
SPC25YER018C SCO2P38072 301 aa10.25□□□□□ -0.77
SPC25YER018C YBR241CP38142 488 aa10.25□□□□□ -0.77
SPC25YER018C LYS12P40495 371 aaKnown RBP10.25□□□□□ -0.77
SPC25YER018C MRPS18P42847 217 aa10.25□□□□□ -0.77
SPC25YER018C HOC1P47124 396 aa10.25□□□□□ -0.77
SPC25YER018C PAC10P48363 199 aa10.25□□□□□ -0.77
SPC25YER018C ASI2P53895 289 aa10.25□□□□□ -0.77
SPC25YER018C OAZ1Q02803 292 aa10.25□□□□□ -0.77
SPC25YER018C SIZ1Q04195 904 aa10.25□□□□□ -0.77
SPC25YER018C GIC2Q06648 383 aa10.25□□□□□ -0.77
SPC25YER018C YLR030WQ07967 263 aa10.25□□□□□ -0.77
SPC25YER018C THP1Q08231 455 aa10.25□□□□□ -0.77
SPC25YER018C TOR2P32600 2474 aaKnown RBP10.24□□□□□ -0.77
SPC25YER018C GAL3P13045 520 aa10.24□□□□□ -0.77
SPC25YER018C YJU2P28320 278 aaPredicted RBP10.24□□□□□ -0.77
SPC25YER018C PTC2P39966 464 aaKnown RBP10.24□□□□□ -0.77
SPC25YER018C CSL4P53859 292 aaPredicted RBP10.24□□□□□ -0.77
SPC25YER018C MDM12Q92328 271 aa10.24□□□□□ -0.77
SPC25YER018C TIM9O74700 87 aa10.23□□□□□ -0.77
SPC25YER018C MER1P16523 270 aa10.23□□□□□ -0.77
SPC25YER018C MSB1P21339 1137 aaKnown RBP10.23□□□□□ -0.77
SPC25YER018C CHA1P25379 360 aaKnown RBP10.23□□□□□ -0.77
SPC25YER018C IMG1P25626 169 aa10.23□□□□□ -0.77
SPC25YER018C BUD14P27637 709 aa10.23□□□□□ -0.77
SPC25YER018C SSH4P32343 579 aa10.23□□□□□ -0.77
SPC25YER018C SLM4P38247 162 aa10.23□□□□□ -0.77
SPC25YER018C YHL012WP38709 493 aa10.23□□□□□ -0.77
SPC25YER018C SWD1P39706 426 aa10.23□□□□□ -0.77
SPC25YER018C YEL020CP39994 560 aa10.23□□□□□ -0.77
SPC25YER018C FAU1P40099 211 aa10.23□□□□□ -0.77
SPC25YER018C ELP2P42935 788 aa10.23□□□□□ -0.77
SPC25YER018C DUG1P43616 481 aaKnown RBP10.23□□□□□ -0.77
SPC25YER018C MRK1P50873 501 aa10.23□□□□□ -0.77
SPC25YER018C RMR1P53060 241 aa10.23□□□□□ -0.77
SPC25YER018C MEU1Q07938 337 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
SPC25YER018C BSC6Q08280 497 aa10.23□□□□□ -0.77
SPC25YER018C WTM1Q12363 437 aaKnown RBP10.23□□□□□ -0.77
SPC25YER018C YDL199CQ12407 687 aa10.23□□□□□ -0.77
SPC25YER018C SKS1Q12505 502 aa10.23□□□□□ -0.77
SPC25YER018C SNF4P12904 322 aa10.22□□□□□ -0.77
SPC25YER018C URA4P20051 364 aa10.22□□□□□ -0.77
SPC25YER018C PRP2P20095 876 aaPredicted RBP10.22□□□□□ -0.77
SPC25YER018C MRPL32P25348 183 aa10.22□□□□□ -0.77
SPC25YER018C YCL049CP25577 312 aa10.22□□□□□ -0.77
SPC25YER018C SPC34P36131 295 aa10.22□□□□□ -0.77
Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms