RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C MLH2Q07980 695 aa1.22□□□□□ -2.21
SEC3YER008C FRE3Q08905 711 aa1.22□□□□□ -2.21
SEC3YER008C FMP40Q08968 688 aaPredicted RBP1.22□□□□□ -2.21
SEC3YER008C RRI1Q12468 440 aa1.22□□□□□ -2.21
SEC3YER008C AUS1Q08409 1394 aa1.22□□□□□ -2.21
SEC3YER008C NFT1P0CE68 1218 aa1.22□□□□□ -2.21
SEC3YER008C KRS1P15180 591 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C FAA1P30624 700 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C PRS1P32895 427 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C SRB2P34162 210 aa1.22□□□□□ -2.21
SEC3YER008C YKL070WP36087 169 aa1.22□□□□□ -2.21
SEC3YER008C ERG7P38604 731 aa1.22□□□□□ -2.21
SEC3YER008C UBA4P38820 440 aa1.22□□□□□ -2.21
SEC3YER008C ERV46P39727 415 aa1.22□□□□□ -2.21
SEC3YER008C DSE1P40077 573 aa1.22□□□□□ -2.21
SEC3YER008C SEC27P41811 889 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C IRC7P43623 340 aa1.22□□□□□ -2.21
SEC3YER008C ALK1P43633 760 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C EKI1Q03764 534 aa1.22□□□□□ -2.21
SEC3YER008C CSI1Q04368 295 aa1.22□□□□□ -2.21
SEC3YER008C RQC1Q05468 723 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C SNA4Q07549 140 aa1.22□□□□□ -2.21
SEC3YER008C YDL007C-AQ2V2Q0 85 aa1.22□□□□□ -2.21
SEC3YER008C LEU4P06208 619 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C RPL31BP0C2H9 113 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C RAP1P11938 827 aa1.22□□□□□ -2.21
SEC3YER008C MER1P16523 270 aa1.22□□□□□ -2.21
SEC3YER008C ART10P18634 518 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C PTC6P25646 442 aa1.22□□□□□ -2.21
SEC3YER008C HCS1P34243 683 aa1.22□□□□□ -2.21
SEC3YER008C MRPL4P36517 319 aa1.22□□□□□ -2.21
SEC3YER008C PEX32P38292 413 aa1.22□□□□□ -2.21
SEC3YER008C DBP8P38719 431 aa1.22□□□□□ -2.21
SEC3YER008C YHR131CP38835 850 aa1.22□□□□□ -2.21
SEC3YER008C MBB1P39534 108 aa1.22□□□□□ -2.21
SEC3YER008C AIM10P39965 576 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C DBP6P53734 629 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C REX2P54964 269 aaKnown RBP1.22□□□□□ -2.21
SEC3YER008C VPS20Q04272 221 aa1.22□□□□□ -2.21
SEC3YER008C SEG1Q04279 960 aa1.22□□□□□ -2.21
SEC3YER008C YLR297WQ05899 129 aa1.22□□□□□ -2.21
SEC3YER008C BSP1Q06604 576 aa1.22□□□□□ -2.21
SEC3YER008C LEA1Q08963 238 aaPredicted RBP1.22□□□□□ -2.21
SEC3YER008C VAM3Q12241 283 aa1.22□□□□□ -2.21
SEC3YER008C ECM29P38737 1868 aa1.21□□□□□ -2.21
SEC3YER008C MF(ALPHA)1P01149 165 aa1.21□□□□□ -2.22
SEC3YER008C ARG81P05085 880 aa1.21□□□□□ -2.22
SEC3YER008C RPS2P25443 254 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C PUP3P25451 205 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C GAC1P28006 793 aa1.21□□□□□ -2.22
SEC3YER008C SOR1P35497 357 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C EBP2P36049 427 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C NUP133P36161 1157 aa1.21□□□□□ -2.22
SEC3YER008C ECM10P39987 644 aa1.21□□□□□ -2.22
SEC3YER008C VID30P53076 958 aa1.21□□□□□ -2.22
SEC3YER008C YGR066CP53242 292 aa1.21□□□□□ -2.22
SEC3YER008C IZH1Q03419 316 aa1.21□□□□□ -2.22
SEC3YER008C HRD3Q05787 833 aa1.21□□□□□ -2.22
SEC3YER008C DCS1Q06151 350 aa1.21□□□□□ -2.22
SEC3YER008C SOR2Q07786 357 aa1.21□□□□□ -2.22
SEC3YER008C MCH4Q08268 501 aa1.21□□□□□ -2.22
SEC3YER008C NCE102Q12207 173 aaRIP-Chip data1.21□□□□□ -2.22not detected
SEC3YER008C TFB5Q3E7C1 72 aaPredicted RBP1.21□□□□□ -2.22
SEC3YER008C LYS2P07702 1392 aa1.21□□□□□ -2.22
SEC3YER008C YPR089WO13585 888 aa1.21□□□□□ -2.22
SEC3YER008C CDC36P06100 191 aaPredicted RBP1.21□□□□□ -2.22
SEC3YER008C RAD52P06778 471 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C PRD1P25375 712 aa1.21□□□□□ -2.22
SEC3YER008C RHB1P25378 209 aa1.21□□□□□ -2.22
SEC3YER008C DEG1P31115 442 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C PDB1P32473 366 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C YIL060WP40519 144 aa1.21□□□□□ -2.22
SEC3YER008C SYG1P40528 902 aa1.21□□□□□ -2.22
SEC3YER008C ULP2P40537 1034 aaPredicted RBP1.21□□□□□ -2.22
SEC3YER008C IAH1P41734 238 aa1.21□□□□□ -2.22
SEC3YER008C QRI1P43123 477 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C NMD5P46970 1048 aa1.21□□□□□ -2.22
SEC3YER008C YPT11P48559 417 aa1.21□□□□□ -2.22
SEC3YER008C KEL2P50090 882 aa1.21□□□□□ -2.22
SEC3YER008C PKP2P53170 491 aa1.21□□□□□ -2.22
SEC3YER008C YMR130WQ04223 302 aa1.21□□□□□ -2.22
SEC3YER008C MSC3Q05812 728 aa1.21□□□□□ -2.22
SEC3YER008C GSH2Q08220 491 aa1.21□□□□□ -2.22
SEC3YER008C BSC6Q08280 497 aa1.21□□□□□ -2.22
SEC3YER008C INP53Q12271 1107 aa1.21□□□□□ -2.22
SEC3YER008C SUT2Q12286 268 aa1.21□□□□□ -2.22
SEC3YER008C CRC1Q12289 327 aa1.21□□□□□ -2.22
SEC3YER008C PDE2P06776 526 aa1.21□□□□□ -2.22
SEC3YER008C PUT2P07275 575 aa1.21□□□□□ -2.22
SEC3YER008C GAL3P13045 520 aa1.21□□□□□ -2.22
SEC3YER008C ALG1P16661 449 aa1.21□□□□□ -2.22
SEC3YER008C GEX1P25596 615 aa1.21□□□□□ -2.22
SEC3YER008C COQ3P27680 312 aa1.21□□□□□ -2.22
SEC3YER008C LTV1P34078 463 aa1.21□□□□□ -2.22
SEC3YER008C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
SEC3YER008C SWH1P35845 1188 aa1.21□□□□□ -2.22
SEC3YER008C YNK1P36010 153 aaKnown RBP1.21□□□□□ -2.22
SEC3YER008C CBP4P37267 147 aa1.21□□□□□ -2.22
SEC3YER008C SWC5P38326 303 aa1.21□□□□□ -2.22
SEC3YER008C DED81P38707 554 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms