RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C EST1P17214 699 aaPredicted RBP4.52□□□□□ -1.69
NUP42YDR192C GLN3P18494 730 aa4.52□□□□□ -1.69
NUP42YDR192C FUR1P18562 216 aaKnown RBP4.52□□□□□ -1.69
NUP42YDR192C TRX1P22217 103 aaKnown RBP4.52□□□□□ -1.69
NUP42YDR192C RRT12P25381 491 aa4.52□□□□□ -1.69
NUP42YDR192C VPH1P32563 840 aaKnown RBP4.52□□□□□ -1.69
NUP42YDR192C PEX5P35056 612 aa4.52□□□□□ -1.69
NUP42YDR192C SRO77P38163 1010 aa4.52□□□□□ -1.69
NUP42YDR192C SWC5P38326 303 aa4.52□□□□□ -1.69
NUP42YDR192C PCA1P38360 1216 aa4.52□□□□□ -1.69
NUP42YDR192C MMS21P38632 267 aa4.52□□□□□ -1.69
NUP42YDR192C YMR134WP40207 237 aa4.52□□□□□ -1.69
NUP42YDR192C AZR1P50080 613 aa4.52□□□□□ -1.69
NUP42YDR192C STP1Q00947 519 aa4.52□□□□□ -1.69
NUP42YDR192C SHR3Q02774 210 aa4.52□□□□□ -1.69
NUP42YDR192C TAF9Q05027 157 aa4.52□□□□□ -1.69
NUP42YDR192C SIL1Q08199 421 aa4.52□□□□□ -1.69
NUP42YDR192C YKL068W-AQ3E826 78 aa4.52□□□□□ -1.69
NUP42YDR192C YPR089WO13585 888 aa4.51□□□□□ -1.69
NUP42YDR192C ART10P18634 518 aaKnown RBP4.51□□□□□ -1.69
NUP42YDR192C CDC10P25342 322 aaKnown RBP4.51□□□□□ -1.69
NUP42YDR192C RSA4P25382 515 aaKnown RBP4.51□□□□□ -1.69
NUP42YDR192C TCD2P36101 447 aaKnown RBP4.51□□□□□ -1.69
NUP42YDR192C OTU2P38747 307 aaKnown RBP4.51□□□□□ -1.69
NUP42YDR192C YER186CP40101 306 aa4.51□□□□□ -1.69
NUP42YDR192C DSN1P40568 576 aa4.51□□□□□ -1.69
NUP42YDR192C MIC19P43594 170 aa4.51□□□□□ -1.69
NUP42YDR192C SGF73P53165 657 aa4.51□□□□□ -1.69
NUP42YDR192C YNL181WP53878 407 aa4.51□□□□□ -1.69
NUP42YDR192C PRM6Q04705 352 aa4.51□□□□□ -1.69
NUP42YDR192C YDR222WQ04925 415 aa4.51□□□□□ -1.69
NUP42YDR192C SPE3Q12074 293 aaKnown RBP4.51□□□□□ -1.69
NUP42YDR192C CTF3Q12748 733 aa4.51□□□□□ -1.69
NUP42YDR192C UBR2Q07963 1872 aa4.51□□□□□ -1.69
NUP42YDR192C GAL80P04387 435 aa4.5□□□□□ -1.69
NUP42YDR192C HAP2P06774 265 aa4.5□□□□□ -1.69
NUP42YDR192C RAD1P06777 1100 aa4.5□□□□□ -1.69
NUP42YDR192C PEP5P12868 1029 aa4.5□□□□□ -1.69
NUP42YDR192C SLY1P22213 666 aa4.5□□□□□ -1.69
NUP42YDR192C PAP1P29468 568 aaKnown RBP4.5□□□□□ -1.69
NUP42YDR192C SEC1P30619 724 aaKnown RBP4.5□□□□□ -1.69
NUP42YDR192C SYN8P31377 255 aa4.5□□□□□ -1.69
NUP42YDR192C DEP1P31385 405 aa4.5□□□□□ -1.69
NUP42YDR192C FRE1P32791 686 aa4.5□□□□□ -1.69
NUP42YDR192C GYP6P32806 458 aa4.5□□□□□ -1.69
NUP42YDR192C MRE11P32829 692 aa4.5□□□□□ -1.69
NUP42YDR192C UIP5P36137 443 aa4.5□□□□□ -1.69
NUP42YDR192C VHC1P38329 1120 aa4.5□□□□□ -1.69
NUP42YDR192C YHL026CP38740 315 aa4.5□□□□□ -1.69
NUP42YDR192C UBA4P38820 440 aa4.5□□□□□ -1.69
NUP42YDR192C END3P39013 349 aa4.5□□□□□ -1.69
NUP42YDR192C PHO90P39535 881 aa4.5□□□□□ -1.69
NUP42YDR192C DSE1P40077 573 aa4.5□□□□□ -1.69
NUP42YDR192C MET18P40469 1032 aa4.5□□□□□ -1.69
NUP42YDR192C IAH1P41734 238 aa4.5□□□□□ -1.69
NUP42YDR192C BRO1P48582 844 aa4.5□□□□□ -1.69
NUP42YDR192C PEX31P53203 462 aa4.5□□□□□ -1.69
NUP42YDR192C TWF1P53250 332 aa4.5□□□□□ -1.69
NUP42YDR192C YNL234WP53857 426 aa4.5□□□□□ -1.69
NUP42YDR192C RSM23Q01163 450 aa4.5□□□□□ -1.69
NUP42YDR192C ARO80Q04052 950 aa4.5□□□□□ -1.69
NUP42YDR192C YMR027WQ04371 470 aa4.5□□□□□ -1.69
NUP42YDR192C KAP95Q06142 861 aaKnown RBP4.5□□□□□ -1.69
NUP42YDR192C THI20Q08224 551 aa4.5□□□□□ -1.69
NUP42YDR192C YOL159CQ08300 171 aa4.5□□□□□ -1.69
NUP42YDR192C ATG29Q12092 213 aa4.5□□□□□ -1.69
NUP42YDR192C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
NUP42YDR192C FKS1P38631 1876 aaKnown RBP4.49□□□□□ -1.69
NUP42YDR192C KGD1P20967 1014 aaKnown RBP4.49□□□□□ -1.69
NUP42YDR192C AIM17P23180 465 aaKnown RBP4.49□□□□□ -1.69
NUP42YDR192C LOS1P33418 1100 aaPredicted RBP4.49□□□□□ -1.69
NUP42YDR192C WBP1P33767 430 aaKnown RBP4.49□□□□□ -1.69
NUP42YDR192C DRE2P36152 348 aa4.49□□□□□ -1.69
NUP42YDR192C RPL32P38061 130 aaKnown RBP4.49□□□□□ -1.69
NUP42YDR192C ANS1P38832 159 aa4.49□□□□□ -1.69
NUP42YDR192C YEL057CP39983 233 aa4.49□□□□□ -1.69
NUP42YDR192C YIL054WP40524 105 aa4.49□□□□□ -1.69
NUP42YDR192C ALK1P43633 760 aaKnown RBP4.49□□□□□ -1.69
NUP42YDR192C TRS85P46944 698 aa4.49□□□□□ -1.69
NUP42YDR192C YJL132WP47014 750 aa4.49□□□□□ -1.69
NUP42YDR192C IMD4P50094 524 aaKnown RBP4.49□□□□□ -1.69
NUP42YDR192C IPI3P53877 555 aa4.49□□□□□ -1.69
NUP42YDR192C YNL040WP53960 456 aaPredicted RBP4.49□□□□□ -1.69
NUP42YDR192C YMR160WQ03823 816 aa4.49□□□□□ -1.69
NUP42YDR192C GYL1Q04322 720 aa4.49□□□□□ -1.69
NUP42YDR192C ADE13Q05911 482 aaKnown RBP4.49□□□□□ -1.69
NUP42YDR192C GSH2Q08220 491 aa4.49□□□□□ -1.69
NUP42YDR192C AAD15Q08361 143 aa4.49□□□□□ -1.69
NUP42YDR192C YDR018CQ12185 396 aa4.49□□□□□ -1.69
NUP42YDR192C RTN2Q12443 393 aa4.49□□□□□ -1.69
NUP42YDR192C SEC39Q12745 709 aa4.49□□□□□ -1.69
NUP42YDR192C BI3Q9ZZW7 517 aa4.49□□□□□ -1.69
NUP42YDR192C MET17P06106 444 aa4.48□□□□□ -1.69
NUP42YDR192C ATP1P07251 545 aaKnown RBP4.48□□□□□ -1.69
NUP42YDR192C CHS1P08004 1131 aa4.48□□□□□ -1.69
NUP42YDR192C YML002WP0CF17 737 aa4.48□□□□□ -1.69
NUP42YDR192C YER190C-BP0CX94 160 aa4.48□□□□□ -1.69
NUP42YDR192C YEL077W-AP0CX95 160 aa4.48□□□□□ -1.69
NUP42YDR192C YGR296C-BP0CX96 160 aa4.48□□□□□ -1.69
NUP42YDR192C YPL283W-BP0CX97 160 aa4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms