RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	ADH5	P38113	351 aa	Known RBP	5.15	□□□□□ -1.59
RPN5	YDL147W	KAP104	P38217	918 aa	Known RBP	5.15	□□□□□ -1.59
RPN5	YDL147W	STN1	P38960	494 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	LYS1	P38998	373 aa	RIP-Chip data	5.15	□□□□□ -1.59	not detected
RPN5	YDL147W	YIL089W	P40500	205 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	IKS1	P47042	667 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	ASN2	P49090	572 aa	Known RBP	5.15	□□□□□ -1.59
RPN5	YDL147W	YIP5	P53108	310 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	ROG1	P53118	685 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	ADA2	Q02336	434 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	DIG1	Q03063	452 aa	Known RBP	5.15	□□□□□ -1.59
RPN5	YDL147W	FMP42	Q04991	504 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	NBL1	Q3E7Y6	73 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	SRN2	Q99176	213 aa		5.15	□□□□□ -1.59
RPN5	YDL147W	CDC21	P06785	304 aa		5.14	□□□□□ -1.59
RPN5	YDL147W	RAD57	P25301	460 aa		5.14	□□□□□ -1.59
RPN5	YDL147W	CRM1	P30822	1084 aa	Known RBP	5.14	□□□□□ -1.59
RPN5	YDL147W	YEL043W	P32618	956 aa		5.14	□□□□□ -1.59
RPN5	YDL147W	PTR2	P32901	601 aa		5.14	□□□□□ -1.59
RPN5	YDL147W	ATO2	P32907	282 aa		5.14	□□□□□ -1.59
RPN5	YDL147W	GWT1	P47026	490 aa		5.14	□□□□□ -1.59
RPN5	YDL147W	SNA4	Q07549	140 aa		5.14	□□□□□ -1.59
RPN5	YDL147W	SGT1	Q08446	395 aa		5.14	□□□□□ -1.59
RPN5	YDL147W	FAA1	P30624	700 aa	Known RBP	5.13	□□□□□ -1.59
RPN5	YDL147W	NDI1	P32340	513 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	SPC110	P32380	944 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	NIP1	P32497	812 aa	Known RBP	5.13	□□□□□ -1.59
RPN5	YDL147W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
RPN5	YDL147W	YBL028C	P38202	106 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	ARC40	P38328	384 aa	Known RBP	5.13	□□□□□ -1.59
RPN5	YDL147W	MNL1	P38888	796 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	YAL037W	P39728	267 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	YER079W	P40052	210 aa	Known RBP	5.13	□□□□□ -1.59
RPN5	YDL147W	YIL169C	P40442	995 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	YIL152W	P40455	235 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	AQR1	P53943	586 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	ODC1	Q03028	310 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	PSY3	Q12318	242 aa		5.13	□□□□□ -1.59
RPN5	YDL147W	ARG4	P04076	463 aa	Predicted RBP	5.12	□□□□□ -1.59
RPN5	YDL147W	UBA1	P22515	1024 aa	Known RBP	5.12	□□□□□ -1.59
RPN5	YDL147W	CTR86	P25355	563 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	INM1	P38710	295 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	MET30	P39014	640 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	SHO1	P40073	367 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	YPS6	P40583	537 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	PAC11	P40960	533 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	CUE3	P53137	624 aa	Known RBP	5.12	□□□□□ -1.59
RPN5	YDL147W	FRE4	P53746	719 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	BET5	Q03630	159 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	GEP3	Q08622	556 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	ATG34	Q12292	412 aa		5.12	□□□□□ -1.59
RPN5	YDL147W	DST1	P07273	309 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	NFT1	P0CE68	1218 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	MTF1	P14908	341 aa	Known RBP	5.11	□□□□□ -1.59
RPN5	YDL147W	BZZ1	P38822	633 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	GPI16	P38875	610 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	RPA34	P47006	233 aa	Predicted RBP	5.11	□□□□□ -1.59
RPN5	YDL147W	SSN8	P47821	323 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	GPI15	P53961	229 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	MMT1	Q03218	510 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	RSN1	Q03516	953 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	SKI7	Q08491	747 aa	Predicted RBP	5.11	□□□□□ -1.59
RPN5	YDL147W	REX3	Q12090	404 aa		5.11	□□□□□ -1.59
RPN5	YDL147W	CHS1	P08004	1131 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	LSB5	P25369	354 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	NDC1	P32500	655 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	YBR056W	P38081	501 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	QDR3	P38227	689 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	SAD1	P43589	448 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	URH1	Q04179	340 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	IPK1	Q06667	281 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	PML1	Q07930	204 aa	Predicted RBP	5.1	□□□□□ -1.59
RPN5	YDL147W	PKH2	Q12236	1081 aa	Known RBP	5.1	□□□□□ -1.59
RPN5	YDL147W	ORT1	Q12375	292 aa		5.1	□□□□□ -1.59
RPN5	YDL147W	TAL1	P15019	335 aa	Known RBP	5.09	□□□□□ -1.59
RPN5	YDL147W	YCR043C	P25361	127 aa		5.09	□□□□□ -1.59
RPN5	YDL147W	GLC7	P32598	312 aa	Known RBP	5.09	□□□□□ -1.59
RPN5	YDL147W	HAT2	P39984	401 aa		5.09	□□□□□ -1.59
RPN5	YDL147W	ALG8	P40351	577 aa		5.09	□□□□□ -1.59
RPN5	YDL147W	TES1	P41903	349 aa	Known RBP	5.09	□□□□□ -1.59
RPN5	YDL147W	PHB2	P50085	310 aa		5.09	□□□□□ -1.59
RPN5	YDL147W	POP6	P53218	158 aa		5.09	□□□□□ -1.59
RPN5	YDL147W	YNL143C	P53908	130 aa		5.09	□□□□□ -1.59
RPN5	YDL147W	TIM18	Q08749	192 aa		5.09	□□□□□ -1.59
RPN5	YDL147W	YPR022C	Q12139	1133 aa		5.09	□□□□□ -1.59
RPN5	YDL147W	TEF1	P02994	458 aa	Known RBP	5.08	□□□□□ -1.6
RPN5	YDL147W	TIP1	P27654	210 aa	Predicted RBP	5.08	□□□□□ -1.6
RPN5	YDL147W	YSC83	P32792	385 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	NAS2	P40555	220 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	MDE1	P47095	244 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	AVT4	P50944	713 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	YNR048W	P53740	393 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	YNR068C	P53754	272 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	PDR16	P53860	351 aa	Known RBP	5.08	□□□□□ -1.6
RPN5	YDL147W	RPM2	Q02773	1202 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	SPH1	Q06160	661 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	SRL1	Q08673	210 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	YPL199C	Q08954	240 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	HIF1	Q12373	385 aa		5.08	□□□□□ -1.6
RPN5	YDL147W	ILV5	P06168	395 aa	Known RBP	5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms