RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	AIM3	P38266	947 aa	Known RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	COS111	P38308	924 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	ARN1	P38731	627 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	CCT6	P39079	546 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	YAL037W	P39728	267 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	FRT2	P39734	528 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	ARF3	P40994	183 aa	RIP-Chip data	3.86	□□□□□ -1.79	RIP-Chip
HSP30	YCR021C	NOP9	P47077	666 aa	Known RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	RTS3	P53289	263 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	PXR1	P53335	271 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	ARC35	P53731	342 aa	Known RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	TGL2	P54857	326 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	PRP38	Q00723	242 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	SPO19	Q03029	223 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	ATP25	Q03153	612 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	MFB1	Q04922	465 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	STP3	Q05937	343 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	GRS2	Q06817	618 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	YOL131W	Q08270	108 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	RRP40	Q08285	240 aa	Known RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	ATG29	Q12092	213 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	RTK1	Q12100	620 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	RRP42	Q12277	265 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	YCL012C	Q8J0M4	134 aa		3.86	□□□□□ -1.79
HSP30	YCR021C	HSH49	Q99181	213 aa	Predicted RBP	3.86	□□□□□ -1.79
HSP30	YCR021C	SOD2	P00447	233 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	RPL24A	P04449	155 aa	Known RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	GCD2	P12754	651 aa	Predicted RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	TAL1	P15019	335 aa	Known RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	REC107	P21651	314 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	CLB4	P24871	460 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	ERG6	P25087	383 aa	Known RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	SPS22	P25380	463 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	SFC1	P33303	322 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	DOM34	P33309	386 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	SKN1	P33336	771 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	PEX6	P33760	1030 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	NTR2	P36118	322 aa	Predicted RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	MRPL17	P36528	281 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	APT2	P36973	181 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	TRM7	P38238	310 aa	Known RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	TDP1	P38319	544 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	FAD1	P38913	306 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	YER034W	P40022	185 aa	Known RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	NDE1	P40215	560 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	MEP1	P40260	492 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	SEC26	P41810	973 aa	Known RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	YJR142W	P47173	342 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	GTO1	P48239	356 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	IMA1	P53051	589 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	VHS1	Q03785	461 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	MTQ2	Q03920	221 aa	Predicted RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	ROY1	Q04847	553 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	GTB1	Q04924	702 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	DYN3	Q04949	312 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	RSC58	Q07979	502 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	SNX3	Q08826	162 aa	Known RBP	3.85	□□□□□ -1.79
HSP30	YCR021C	MMT2	Q08970	484 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	MCD1	Q12158	566 aa		3.85	□□□□□ -1.79
HSP30	YCR021C	RPS9A	O13516	197 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	ATP2	P00830	511 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	ATP6	P00854	259 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	RAS2	P01120	322 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	UNG1	P12887	359 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	HOP1	P20050	605 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	PRI2	P20457	528 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	YCR006C	P25350	157 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	CHA1	P25379	360 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	RAD51	P25454	400 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	MXR2	P25566	168 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	RPL5	P26321	297 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	CWP1	P28319	239 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	CDC13	P32797	924 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	COX13	P32799	129 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	YKL100C	P34248	587 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	FRE2	P36033	711 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	BAP2	P38084	609 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	ROT2	P38138	954 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	OCA5	P38738	679 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	ERV46	P39727	415 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	ECM10	P39987	644 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	RGI1	P40043	161 aa	Predicted RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	APQ12	P40532	138 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	DUG1	P43616	481 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	ALK1	P43633	760 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	MPS3	P47069	682 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	NAS6	P50086	228 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	ROG1	P53118	685 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	CDH1	P53197	566 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	NRM1	P53718	249 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	RRP45	Q05636	305 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	ATG26	Q06321	1198 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	HDA2	Q06629	674 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	RUP1	Q12242	671 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	YDR262W	Q12331	272 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	YPR064W	Q12492	139 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	RRP12	Q12754	1228 aa	Known RBP	3.84	□□□□□ -1.79
HSP30	YCR021C	SAS5	Q99314	248 aa		3.84	□□□□□ -1.79
HSP30	YCR021C	IRA2	P19158	3079 aa		3.84	□□□□□ -1.8
HSP30	YCR021C	CBP2	P03874	630 aa	Predicted RBP	3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 25 ms