RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W VPS68Q12016 184 aa6.18□□□□□ -1.42
LDB16YCL005W RPN5Q12250 445 aaKnown RBP6.18□□□□□ -1.42
LDB16YCL005W RPN6Q12377 434 aa6.18□□□□□ -1.42
LDB16YCL005W YKL018C-AQ3E7A7 99 aa6.18□□□□□ -1.42
LDB16YCL005W STT4P37297 1900 aa6.17□□□□□ -1.42
LDB16YCL005W INH1P01097 85 aa6.17□□□□□ -1.42
LDB16YCL005W CBP2P03874 630 aaPredicted RBP6.17□□□□□ -1.42
LDB16YCL005W KAR1P11927 433 aa6.17□□□□□ -1.42
LDB16YCL005W COQ2P32378 372 aa6.17□□□□□ -1.42
LDB16YCL005W UGP1P32861 499 aaKnown RBP6.17□□□□□ -1.42
LDB16YCL005W RPT5P33297 434 aaKnown RBP6.17□□□□□ -1.42
LDB16YCL005W DEF1P35732 738 aaKnown RBP6.17□□□□□ -1.42
LDB16YCL005W GLG1P36143 616 aa6.17□□□□□ -1.42
LDB16YCL005W SKG1P36169 355 aa6.17□□□□□ -1.42
LDB16YCL005W COS111P38308 924 aa6.17□□□□□ -1.42
LDB16YCL005W YPT35P38815 214 aaKnown RBP6.17□□□□□ -1.42
LDB16YCL005W CAB2P40506 365 aa6.17□□□□□ -1.42
LDB16YCL005W AIM22P47051 409 aa6.17□□□□□ -1.42
LDB16YCL005W AAT1Q01802 451 aa6.17□□□□□ -1.42
LDB16YCL005W SKI8Q02793 397 aaPredicted RBP6.17□□□□□ -1.42
LDB16YCL005W SSQ1Q05931 657 aaPredicted RBP6.17□□□□□ -1.42
LDB16YCL005W PSY3Q12318 242 aa6.17□□□□□ -1.42
LDB16YCL005W BEM2P39960 2167 aaKnown RBP6.17□□□□□ -1.42
LDB16YCL005W RAP1P11938 827 aa6.16□□□□□ -1.42
LDB16YCL005W SPB1P25582 841 aaPredicted RBP6.16□□□□□ -1.42
LDB16YCL005W YBR241CP38142 488 aa6.16□□□□□ -1.42
LDB16YCL005W SLM4P38247 162 aa6.16□□□□□ -1.42
LDB16YCL005W YHR218WP38899 603 aa6.16□□□□□ -1.42
LDB16YCL005W COS12P53053 380 aa6.16□□□□□ -1.42
LDB16YCL005W GOR1P53839 350 aa6.16□□□□□ -1.42
LDB16YCL005W ASI2P53895 289 aa6.16□□□□□ -1.42
LDB16YCL005W YNL095CP53932 642 aa6.16□□□□□ -1.42
LDB16YCL005W SMA1Q02651 245 aa6.16□□□□□ -1.42
LDB16YCL005W GIP3Q03016 1276 aa6.16□□□□□ -1.42
LDB16YCL005W PEX12Q04370 399 aa6.16□□□□□ -1.42
LDB16YCL005W COS7Q07788 383 aa6.16□□□□□ -1.42
LDB16YCL005W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
LDB16YCL005W PLB3Q08108 686 aa6.16□□□□□ -1.42
LDB16YCL005W SAM4Q08985 325 aaKnown RBP6.16□□□□□ -1.42
LDB16YCL005W NMD4Q12129 218 aa6.16□□□□□ -1.42
LDB16YCL005W NTO1Q12311 748 aa6.16□□□□□ -1.42
LDB16YCL005W SNF8Q12483 233 aa6.16□□□□□ -1.42
LDB16YCL005W Q0010Q9ZZX9 128 aa6.16□□□□□ -1.42
LDB16YCL005W SUI3P09064 285 aaKnown RBP6.15□□□□□ -1.42
LDB16YCL005W SNF4P12904 322 aa6.15□□□□□ -1.42
LDB16YCL005W CMK2P22517 447 aa6.15□□□□□ -1.42
LDB16YCL005W PEX3P28795 441 aa6.15□□□□□ -1.42
LDB16YCL005W CDC5P32562 705 aa6.15□□□□□ -1.42
LDB16YCL005W MGM101P32787 269 aaKnown RBP6.15□□□□□ -1.42
LDB16YCL005W YBR184WP38299 523 aa6.15□□□□□ -1.42
LDB16YCL005W YHL012WP38709 493 aa6.15□□□□□ -1.42
LDB16YCL005W ATG7P38862 630 aa6.15□□□□□ -1.42
LDB16YCL005W YJL070CP40361 888 aa6.15□□□□□ -1.42
LDB16YCL005W RIC1P40395 1056 aa6.15□□□□□ -1.42
LDB16YCL005W SNL1P40548 159 aa6.15□□□□□ -1.42
LDB16YCL005W TIM54P47045 478 aa6.15□□□□□ -1.42
LDB16YCL005W COQ5P49017 307 aa6.15□□□□□ -1.42
LDB16YCL005W YNR068CP53754 272 aa6.15□□□□□ -1.42
LDB16YCL005W SNO2P53823 222 aa6.15□□□□□ -1.42
LDB16YCL005W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
LDB16YCL005W YMR226CQ05016 267 aaKnown RBP6.15□□□□□ -1.42
LDB16YCL005W NSI1Q12457 570 aa6.15□□□□□ -1.42
LDB16YCL005W SEC39Q12745 709 aa6.15□□□□□ -1.42
LDB16YCL005W NAG1Q8TGN9 163 aa6.15□□□□□ -1.42
LDB16YCL005W RPS21AP0C0V8 87 aaKnown RBP6.14□□□□□ -1.43
LDB16YCL005W ATR1P13090 542 aa6.14□□□□□ -1.43
LDB16YCL005W MSB1P21339 1137 aaKnown RBP6.14□□□□□ -1.43
LDB16YCL005W MRPS28P21771 286 aa6.14□□□□□ -1.43
LDB16YCL005W TRX3P25372 127 aa6.14□□□□□ -1.43
LDB16YCL005W DMC1P25453 334 aa6.14□□□□□ -1.43
LDB16YCL005W SEC17P32602 292 aa6.14□□□□□ -1.43
LDB16YCL005W TFB1P32776 642 aa6.14□□□□□ -1.43
LDB16YCL005W SPO23P33757 523 aa6.14□□□□□ -1.43
LDB16YCL005W EMC3P36039 253 aa6.14□□□□□ -1.43
LDB16YCL005W RRP3P38712 501 aaKnown RBP6.14□□□□□ -1.43
LDB16YCL005W GGC1P38988 300 aa6.14□□□□□ -1.43
LDB16YCL005W RBG1P39729 369 aa6.14□□□□□ -1.43
LDB16YCL005W MTW1P39731 289 aa6.14□□□□□ -1.43
LDB16YCL005W PDS1P40316 373 aaPredicted RBP6.14□□□□□ -1.43
LDB16YCL005W VHR1P40522 640 aa6.14□□□□□ -1.43
LDB16YCL005W AGP3P43548 558 aa6.14□□□□□ -1.43
LDB16YCL005W MRK1P50873 501 aa6.14□□□□□ -1.43
LDB16YCL005W RMR1P53060 241 aa6.14□□□□□ -1.43
LDB16YCL005W TNA1P53322 534 aa6.14□□□□□ -1.43
LDB16YCL005W YPL113CQ02961 396 aa6.14□□□□□ -1.43
LDB16YCL005W YKU80Q04437 629 aa6.14□□□□□ -1.43
LDB16YCL005W VPS74Q06385 345 aa6.14□□□□□ -1.43
LDB16YCL005W NDL1Q06568 189 aa6.14□□□□□ -1.43
LDB16YCL005W GPI11Q06636 219 aa6.14□□□□□ -1.43
LDB16YCL005W MFG1Q07684 458 aa6.14□□□□□ -1.43
LDB16YCL005W YOL131WQ08270 108 aa6.14□□□□□ -1.43
LDB16YCL005W GET4Q12125 312 aa6.14□□□□□ -1.43
LDB16YCL005W YOR342CQ12182 319 aa6.14□□□□□ -1.43
LDB16YCL005W YPL066WQ12194 479 aa6.14□□□□□ -1.43
LDB16YCL005W SUL2Q12325 893 aa6.14□□□□□ -1.43
LDB16YCL005W MDM35O60200 86 aa6.13□□□□□ -1.43
LDB16YCL005W RAD7P06779 565 aa6.13□□□□□ -1.43
LDB16YCL005W UNG1P12887 359 aa6.13□□□□□ -1.43
LDB16YCL005W DAP2P18962 818 aa6.13□□□□□ -1.43
LDB16YCL005W RML2P32611 393 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms