RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C URH1Q04179 340 aa4.12□□□□□ -1.75
NPL4YBR170C YMR111CQ04461 462 aaPredicted RBP4.12□□□□□ -1.75
NPL4YBR170C SMA2Q04658 369 aa4.12□□□□□ -1.75
NPL4YBR170C BNA5Q05979 453 aa4.12□□□□□ -1.75
NPL4YBR170C RAD61Q99359 647 aa4.12□□□□□ -1.75
NPL4YBR170C HIS4P00815 799 aaKnown RBP4.12□□□□□ -1.75
NPL4YBR170C YPT1P01123 206 aaKnown RBP4.12□□□□□ -1.75
NPL4YBR170C CTR86P25355 563 aa4.12□□□□□ -1.75
NPL4YBR170C VPS17P32913 551 aa4.12□□□□□ -1.75
NPL4YBR170C PDR3P33200 976 aa4.12□□□□□ -1.75
NPL4YBR170C PPZ2P33329 710 aa4.12□□□□□ -1.75
NPL4YBR170C YPK3P38070 525 aa4.12□□□□□ -1.75
NPL4YBR170C ERG7P38604 731 aa4.12□□□□□ -1.75
NPL4YBR170C OSH3P38713 996 aaKnown RBP4.12□□□□□ -1.75
NPL4YBR170C VPS45P38932 577 aa4.12□□□□□ -1.75
NPL4YBR170C CSM2P40465 213 aa4.12□□□□□ -1.75
NPL4YBR170C RTS2P40962 232 aa4.12□□□□□ -1.75
NPL4YBR170C SNO3P43544 222 aa4.12□□□□□ -1.75
NPL4YBR170C AIP1P46680 615 aaKnown RBP4.12□□□□□ -1.75
NPL4YBR170C RPN14P53196 417 aa4.12□□□□□ -1.75
NPL4YBR170C PCP1P53259 346 aa4.12□□□□□ -1.75
NPL4YBR170C SAM50P53969 484 aa4.12□□□□□ -1.75
NPL4YBR170C CUR1Q06469 252 aa4.12□□□□□ -1.75
NPL4YBR170C THI20Q08224 551 aa4.12□□□□□ -1.75
NPL4YBR170C YLL056CQ12177 298 aa4.12□□□□□ -1.75
NPL4YBR170C RNH203Q12338 110 aa4.12□□□□□ -1.75
NPL4YBR170C CDC37P06101 506 aaKnown RBP4.11□□□□□ -1.75
NPL4YBR170C IMA3P0CW40 589 aa4.11□□□□□ -1.75
NPL4YBR170C IMA4P0CW41 589 aa4.11□□□□□ -1.75
NPL4YBR170C RGT1P32862 1170 aa4.11□□□□□ -1.75
NPL4YBR170C YBL028CP38202 106 aa4.11□□□□□ -1.75
NPL4YBR170C YHR131CP38835 850 aa4.11□□□□□ -1.75
NPL4YBR170C MNN9P39107 395 aaKnown RBP4.11□□□□□ -1.75
NPL4YBR170C YER079WP40052 210 aaKnown RBP4.11□□□□□ -1.75
NPL4YBR170C IAH1P41734 238 aa4.11□□□□□ -1.75
NPL4YBR170C YFR018CP43599 363 aa4.11□□□□□ -1.75
NPL4YBR170C RTT102P53330 157 aa4.11□□□□□ -1.75
NPL4YBR170C GPI15P53961 229 aa4.11□□□□□ -1.75
NPL4YBR170C STE23Q06010 1027 aa4.11□□□□□ -1.75
NPL4YBR170C ORM2Q06144 216 aa4.11□□□□□ -1.75
NPL4YBR170C IMA2Q08295 589 aa4.11□□□□□ -1.75
NPL4YBR170C NRT1Q08485 598 aa4.11□□□□□ -1.75
NPL4YBR170C AFT2Q08957 416 aa4.11□□□□□ -1.75
NPL4YBR170C BSC1Q12140 328 aa4.11□□□□□ -1.75
NPL4YBR170C GAL7P08431 366 aa4.1□□□□□ -1.75
NPL4YBR170C PUT4P15380 627 aa4.1□□□□□ -1.75
NPL4YBR170C THR4P16120 514 aaKnown RBP4.1□□□□□ -1.75
NPL4YBR170C ILV6P25605 309 aaKnown RBP4.1□□□□□ -1.75
NPL4YBR170C FRE1P32791 686 aa4.1□□□□□ -1.75
NPL4YBR170C PEX2P32800 271 aa4.1□□□□□ -1.75
NPL4YBR170C ISC1P40015 477 aaKnown RBP4.1□□□□□ -1.75
NPL4YBR170C CFD1P40558 293 aa4.1□□□□□ -1.75
NPL4YBR170C YNL181WP53878 407 aa4.1□□□□□ -1.75
NPL4YBR170C ALF1P53904 254 aa4.1□□□□□ -1.75
NPL4YBR170C EGD1Q02642 157 aaKnown RBP4.1□□□□□ -1.75
NPL4YBR170C STD1Q02794 444 aa4.1□□□□□ -1.75
NPL4YBR170C IZH1Q03419 316 aa4.1□□□□□ -1.75
NPL4YBR170C MSS11Q03825 758 aa4.1□□□□□ -1.75
NPL4YBR170C ECI1Q05871 280 aa4.1□□□□□ -1.75
NPL4YBR170C ECM7Q06200 448 aa4.1□□□□□ -1.75
NPL4YBR170C LSP1Q12230 341 aaKnown RBP4.1□□□□□ -1.75
NPL4YBR170C ATG34Q12292 412 aa4.1□□□□□ -1.75
NPL4YBR170C BNR1P40450 1375 aa4.1□□□□□ -1.75
NPL4YBR170C DST1P07273 309 aa4.09□□□□□ -1.75
NPL4YBR170C SAM1P10659 382 aaKnown RBP4.09□□□□□ -1.75
NPL4YBR170C GAL3P13045 520 aa4.09□□□□□ -1.75
NPL4YBR170C AMD1P15274 810 aaKnown RBP4.09□□□□□ -1.75
NPL4YBR170C PET18P25362 215 aa4.09□□□□□ -1.75
NPL4YBR170C ECM15P35195 104 aa4.09□□□□□ -1.75
NPL4YBR170C YIL024CP40543 189 aa4.09□□□□□ -1.75
NPL4YBR170C HMS2P47175 358 aa4.09□□□□□ -1.75
NPL4YBR170C NUP53Q03790 475 aa4.09□□□□□ -1.75
NPL4YBR170C YMR087WQ04299 284 aa4.09□□□□□ -1.75
NPL4YBR170C URC2Q04411 772 aa4.09□□□□□ -1.75
NPL4YBR170C AAD15Q08361 143 aa4.09□□□□□ -1.75
NPL4YBR170C PEX27Q08580 376 aa4.09□□□□□ -1.75
NPL4YBR170C PKH2Q12236 1081 aaKnown RBP4.09□□□□□ -1.75
NPL4YBR170C YIL002W-AQ3E7Z5 69 aa4.09□□□□□ -1.75
NPL4YBR170C TUB1P09733 447 aaKnown RBP4.09□□□□□ -1.76
NPL4YBR170C RPL12AP0CX53 165 aaKnown RBP4.09□□□□□ -1.76
NPL4YBR170C RPL12BP0CX54 165 aa4.09□□□□□ -1.76
NPL4YBR170C ACH1P32316 526 aa4.09□□□□□ -1.76
NPL4YBR170C AIM20P40451 204 aa4.09□□□□□ -1.76
NPL4YBR170C LOC1P43586 204 aaPredicted RBP4.09□□□□□ -1.76
NPL4YBR170C PMT5P52867 743 aa4.09□□□□□ -1.76
NPL4YBR170C YIP1P53039 248 aa4.09□□□□□ -1.76
NPL4YBR170C YLR413WQ06689 675 aa4.09□□□□□ -1.76
NPL4YBR170C REX4Q08237 289 aa4.09□□□□□ -1.76
NPL4YBR170C ORT1Q12375 292 aa4.09□□□□□ -1.76
NPL4YBR170C RMD5Q12508 421 aa4.09□□□□□ -1.76
NPL4YBR170C OPI3P05375 206 aa4.08□□□□□ -1.76
NPL4YBR170C MAS1P10507 462 aa4.08□□□□□ -1.76
NPL4YBR170C HOM2P13663 365 aaKnown RBP4.08□□□□□ -1.76
NPL4YBR170C EXO70P19658 623 aa4.08□□□□□ -1.76
NPL4YBR170C YAP1P19880 650 aaKnown RBP4.08□□□□□ -1.76
NPL4YBR170C MGR1P25573 417 aa4.08□□□□□ -1.76
NPL4YBR170C ATP3P38077 311 aaKnown RBP4.08□□□□□ -1.76
NPL4YBR170C FLO5P38894 1075 aa4.08□□□□□ -1.76
NPL4YBR170C CWC22P53333 577 aaKnown RBP4.08□□□□□ -1.76
NPL4YBR170C ESBP6P53918 673 aa4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms