RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CFAP54Q96N23 3096 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 SMCO2A6NFE2 343 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 CABYRO75952 493 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 F13A1P00488 732 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 PFKMP08237 780 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 ACTN1P12814 892 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 ALAS1P13196 640 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 GNA11P29992 359 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 STAT3P40763 770 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 RESTQ13127 1097 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 NPY5RQ15761 445 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 CCSAPQ6IQ19 270 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-228ENST00000641847 GALNT17Q6IS24 598 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 RIOX2Q8IUF8 465 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 DAGLBQ8NCG7 672 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 OXER1Q8TDS5 423 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 CUL5Q93034 780 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 ZMYND12Q9H0C1 365 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 C11orf16Q9NQ32 467 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 HOMER2Q9NSB8 354 aa10.73□□□□□ -0.69
PHGDH-228ENST00000641847 MRPL11Q9Y3B7 192 aaKnown RBP10.73□□□□□ -0.69
PHGDH-228ENST00000641847 BTBD18B2RXH4 712 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 ZEB2O60315 1214 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 CA3P07451 260 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 MYOGP15173 224 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 SSTR3P32745 418 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-228ENST00000641847 CCL23P55773 120 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 NHLH1Q02575 133 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 TKFCQ3LXA3 575 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 BLIDQ8IZY5 108 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 GJD3Q8N144 294 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 BICD2Q8TD16 824 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 ARNTL2Q8WYA1 636 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 FOXP1Q9H334 677 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-228ENST00000641847 PSTPIP2Q9H939 334 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 RNF146Q9NTX7 359 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 USP34Q70CQ2 3546 aa10.72□□□□□ -0.69
PHGDH-228ENST00000641847 SMCHD1A6NHR9 2005 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 NFIBO00712 420 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 OPLAHO14841 1288 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 ADAMTS3O15072 1205 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 CD4P01730 458 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 MRPL12P52815 198 aaKnown RBP10.71□□□□□ -0.69
PHGDH-228ENST00000641847 GJA9P57773 515 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 NR5A1Q13285 461 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 ACVR2BQ13705 512 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 UBE2SQ16763 222 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 MUM1L1Q5H9M0 696 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 PRRC2BQ5JSZ5 2229 aaKnown RBP10.71□□□□□ -0.69
PHGDH-228ENST00000641847 BRAPQ7Z569 592 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 ZNF467Q7Z7K2 595 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-228ENST00000641847 MCF2L2Q86YR7 1114 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 NOSTRINQ8IVI9 506 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 REXO1Q8N1G1 1221 aaKnown RBP10.71□□□□□ -0.69
PHGDH-228ENST00000641847 RASGRP4Q8TDF6 673 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 CLEC4DQ8WXI8 215 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 TNFRSF25Q93038 417 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 GLT8D2Q9H1C3 349 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 ABHD16BQ9H3Z7 469 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 ZSCAN16Q9H4T2 348 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-228ENST00000641847 ACAD9Q9H845 621 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 CERS4Q9HA82 394 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 PCDHA6Q9UN73 950 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 RIPK3Q9Y572 518 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 PCDHA8Q9Y5H6 950 aa10.71□□□□□ -0.69
PHGDH-228ENST00000641847 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 M0R2N6 131 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 RFXAPO00287 272 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 CFBP00751 764 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 U2AF2P26368 475 aaKnown RBP eCLIP10.7□□□□□ -0.7
PHGDH-228ENST00000641847 CLK2P49760 499 aaKnown RBP10.7□□□□□ -0.7
PHGDH-228ENST00000641847 CCDC144BQ3MJ40 725 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 JAKMIP3Q5VZ66 844 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 MAMDC4Q6UXC1 1216 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 SLC30A10Q6XR72 485 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 PIK3AP1Q6ZUJ8 805 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 CHST13Q8NET6 341 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 PHOSPHO2Q8TCD6 241 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.7
PHGDH-228ENST00000641847 TNPO1Q92973 898 aaKnown RBP10.7□□□□□ -0.7
PHGDH-228ENST00000641847 SLC9A7Q96T83 725 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 UPF3AQ9H1J1 476 aaKnown RBP10.7□□□□□ -0.7
PHGDH-228ENST00000641847 TMEM260Q9NX78 707 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 LMCD1Q9NZU5 365 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 CACNA1AO00555 2505 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 TRIOO75962 3097 aa10.7□□□□□ -0.7
PHGDH-228ENST00000641847 C5orf42Q9H799 3197 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 FAM205CA6NFA0 338 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 GCOM1H8Y6P7 765 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-228ENST00000641847 PIK3CDO00329 1044 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 SNAI1O95863 264 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-228ENST00000641847 SUPT20HL2P0C7V6 817 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 POLR2MP0CAP2 368 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 HOXA13P31271 388 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-228ENST00000641847 HSD17B4P51659 736 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 FOXK2Q01167 660 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 GHRHRQ02643 423 aa10.69□□□□□ -0.7
PHGDH-228ENST00000641847 AP3B2Q13367 1082 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms